| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1152 |
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| Symbol | |
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| ID | 6408808 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1221959 |
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| End bp | 1222960 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 642711050 |
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| Product | NADH ubiquinone oxidoreductase 20 kDa subunit |
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| Protein accession | YP_001990167 |
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| Protein GI | 192289562 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG1740] Ni,Fe-hydrogenase I small subunit |
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| TIGRFAM ID | [TIGR00391] hydrogenase (NiFe) small subunit (hydA) |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACTCCT TCGACATCCT TTGGCTGCAA GGAGCCAGCT GCGGCGGCTG CACCATGGCG
GCGCTGGACG GCGGGCATTC CGGCTGGTTT GCCGAGCTGA AGCGGTTCGG CATCGATCTG
CTGTGGCATC CTTCCGTGAG CGAGGCGACC GCCGAAGAGG CGGTGGCGAT CTTCGAACGC
ATTGCGTCCG GCGAGCAGAA GCTCGGCGCG TTGGTGCTGG AAGGCGCCGT GCTGCGCGGG
CCAAATGGCA GTGGCCGGTT CAATATGCTC GGCGGCACCG GGCGTTCGAT GCTGCATTGG
GTGACGGCGC TGGCGCCGCG CGCCGATTAT GTGGTCGCGG CGGGAAGCTG CGCGGCGTTC
GGCGGCGTGC CGATGGCCGG CGGCAATCCG ACCGACGCCA GCGGCCTGCA ATATGCGGCG
GCAGAGCCAG GCGGCGTCCT CGGCACGGCC TTCCGCTCCC GCGCCGGGCT GCCGGTCATC
AACATCGCCG GCTGCGCGCC GCATCCCGGC TGGATTTCCG AAACACTGGC CGCGCTGGCG
CTTGGCGGTG TCGACACCGC CGCGCTCGAT GCGTTCGGCC GGCCGCGGTT CTTCGCCGAT
CATCTGGCGC ATCACGGCTG CGCCCGCAAC GAGTACTACG AGTTCAAGGC CAGCGCCGAG
GAGCTGTCGC AGCAGGGCTG CCTGATGGAG CATCTCGGCT GCAAGGCGAC CCAGGCGGTC
GGTGACTGCA ATCAGCGCGG CTGGAACGGC AGCGGCTCCT GCACCAGCGG CGGCTATGCC
TGCATCGCCT GCACCTCGCC GGGCTTCGAG TCCTCCCAGG GCTTCATGGA AACCGCCAAG
CTCGCCGGCA TTCCGGTCGG TCTGCCGCTG GACATGCCGA AGGCGTGGTT CGTCGCGCTG
GCGGCGCTGT CGAAATCGGC GACGCCGAAG CGGGTTCGCG CCAACGCGGC GGCGGATCAC
ATCGTGGTGC CGCCGCGCAG CGATCCCGGC CGGCGGCCAT GA
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| Protein sequence | MDSFDILWLQ GASCGGCTMA ALDGGHSGWF AELKRFGIDL LWHPSVSEAT AEEAVAIFER
IASGEQKLGA LVLEGAVLRG PNGSGRFNML GGTGRSMLHW VTALAPRADY VVAAGSCAAF
GGVPMAGGNP TDASGLQYAA AEPGGVLGTA FRSRAGLPVI NIAGCAPHPG WISETLAALA
LGGVDTAALD AFGRPRFFAD HLAHHGCARN EYYEFKASAE ELSQQGCLME HLGCKATQAV
GDCNQRGWNG SGSCTSGGYA CIACTSPGFE SSQGFMETAK LAGIPVGLPL DMPKAWFVAL
AALSKSATPK RVRANAAADH IVVPPRSDPG RRP
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