Gene Rpal_1145 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1145 
Symbol 
ID6408801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp1214422 
End bp1215051 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content64% 
IMG OID642711044 
Producthypothetical protein 
Protein accessionYP_001990161 
Protein GI192289556 
COG category[R] General function prediction only 
COG ID[COG3571] Predicted hydrolase of the alpha/beta-hydrolase fold 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATCTATT CTCCCGCGAT GGCCCAATCC ACTTTCGCCT TCCTGCTTGC GCCCGGGGCT 
GGAGCTTCGA GCGACCATCC GCGAATGCAG GAGTTCGCCT GCCTTTTAGC GCCTCTGGGC 
GAGGTGGTGA CTTTTGACTA TCCCTATATG CTGGAGGGAC GAAAGCGGCC AGATCCGTTG 
CCGAAGCTGG TTGCTGCCCA TCGCGAAGCG CTCGTCGGCG TCGCCGATCG CCACCGTGGC 
CCGGTTGTCC TTGTCGGCAA GAGCATGGGC GGGCGCGTCG GCTGCCACCT CGCCCTGGCA 
GTGCCCGTCA CAGGCGTCAT CTGTCTCGGC TACCCTTTGT GTGGCGCAGG CGATCCCGCC 
AAGCTCCGCG ATCAGGTTCT GACTGAACTG CGCACGCCGA TCCTCTTCGT ACAGGGGACG 
CGCGACAAAC TCTGCCCGCT CGATTTGCTC GAGGCCACAC GCGAGAAGAT GTCTGCGCCC 
TCCCGCCTGC ATGTTGTTTC AGGCGGCGAT CATTCGCTGT TGGTCTCGAA AACCGCACTG 
AAGGCGCAGG GCCGCAGCCA GGCCGATGTC GACGCGGAGA TCGGGACGGC GGTCGCCGAA 
TTCCTGCTCG GCCTGTCGGG CGAAGCCTAA
 
Protein sequence
MIYSPAMAQS TFAFLLAPGA GASSDHPRMQ EFACLLAPLG EVVTFDYPYM LEGRKRPDPL 
PKLVAAHREA LVGVADRHRG PVVLVGKSMG GRVGCHLALA VPVTGVICLG YPLCGAGDPA 
KLRDQVLTEL RTPILFVQGT RDKLCPLDLL EATREKMSAP SRLHVVSGGD HSLLVSKTAL 
KAQGRSQADV DAEIGTAVAE FLLGLSGEA