Gene Rpal_1122 details

Gene Information

• Locus tag: Rpal_1122
• ID: 6408778
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 1187424
• End bp: 1187999
• Gene Length: 576 bp
• Protein Length: 191 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642711023
• Product: hypothetical protein
• Protein accession: YP_001990140
• Protein GI: 192289535

Plasmid Coverage information

• Num covering plasmid clones: 29
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACCGACT TCGAGAGGCG ACTACGCAGC GACCTCGAGC CGCACCTGGC GGCGGAGGAT 
CCGCGCGCCA AGATCAGCGC GTACCACGAC ATGCCGTACG CACTGTTCCG CTACGATCCG 
GAGCAGGAGT TCGCGCTGCG CCGGGAACTG ACGATGCTCG CGACCCGCCT GACCCAGAAG 
GGCAAACGGA TCACGCGCAT CTCGCTGGCG GAATGCCTTT CGGAGGCCAT GACCTCGCAA 
AGGCCGCTCG AGGATTGGTA CGTTGCCGAG CGGTCCGGCA CGGTCGAGGA GACCGTGCAG 
ACCATCACCA ACATCCTCGA GGAGTACGCG CCGCTGGTCG ATCTCGTCGC CGCGCGCATG 
CCGGAGGATC CGGACCCGAA AAAGGACATC GTGCTGATCT CCCGCACCGG GGCTCTGTTT 
CCCGTCTACC GCACCTTCTC GCTGCTGGAG CAGCTGAAGG GCCGGGTACA CGTGCCGACC 
ATCCTTTTCT ACCCGGGAGA CCTCGACGGC GCTGCGGGGC TGCGTTTCAT GGGCGAGCTC 
GACGCCGAAC ACAATTATCG ACCGAAGATC TTCTGA 

 

Protein sequence

MTDFERRLRS DLEPHLAAED PRAKISAYHD MPYALFRYDP EQEFALRREL TMLATRLTQK 
GKRITRISLA ECLSEAMTSQ RPLEDWYVAE RSGTVEETVQ TITNILEEYA PLVDLVAARM 
PEDPDPKKDI VLISRTGALF PVYRTFSLLE QLKGRVHVPT ILFYPGDLDG AAGLRFMGEL 
DAEHNYRPKI F