| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1099 |
|---|
| Symbol | |
|---|
| ID | 6408755 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1164974 |
|---|
| End bp | 1166158 |
|---|
| Gene Length | 1185 bp |
|---|
| Protein Length | 394 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 57% |
|---|
| IMG OID | 642711005 |
|---|
| Product | putative membrane protein of unknown function with acyltransferase family protein domain |
|---|
| Protein accession | YP_001990122 |
|---|
| Protein GI | 192289517 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGATGA CATCGCATGC GGCTACTCCA ACGGACGCCG AGGCCATACC AAACCTCAAT
ACGCGCAACG TGGCGTTGGA TCGCGTTCGT ACATTTCTGA CACTCGTAGT TCTGCTGCAT
CACGCAGTAA TTCCGTACAC ATACTTCGGC CAAACTGACG CAAAATCGTG GATCGGCTTC
GATGCGATTA TTCTCGCCAC GGATAGCTTC TTCATGGCGA TGTTCTTCTT CCTCTCTGGG
CTGTTCGTAT GGCCGAGTCT CGCGGACAAG GAGGCCGAGA AGTTCTTACG CGATCGTCTG
CTTCGGCTCG CCCTGCCCTT TGCGCTTGCG GCGCTAACTG TCATCCCGAT CGCCTATTTT
GCGATCGCGC TGCGCCGATC CCCAGGTACA ACTTTTGCTG TGTTCTGGTG GAAAACCATC
ACGGTCGGAC CGTGGCCAAG TGGACCAGTG TGGTTCGCTT GGGTGCTGCT GGCATTTGAT
CTTACGGCCA GCGTGCTGTA TCGCGTCTCG CCCAATCTGG TCGATCCGAT CAATAGGTTG
TCGCTCCGTG GCTGCGGTCG GCCGACCGAC TTCTTCATCT TCCTGCTTGT CATGACGGCT
ATGCTTTACA TTCCGATGCG GATCTATTTC GGACCGGGCC GATGGTTCGA GTTCGGGCCG
TTCTCGGTTC AGGCCAGCCG CGTGCTGCTC TATCCGGCCT ACTTCATGAT CGGAGTAGGC
GTGGGAGCTG CGAATCTTCA TCGTGGCCTA CTGAGCATGG ACGGACGGCT CGCCAAGAAT
AGTTGGGTTT GGGCCGTTGC GGCCCTCGCT CCTTACTGCC TGTTGTGGGC GCTGATCTTC
GTCAAACGCG GGATGCTGGA GAATCCGGTG TGGCTGCCTG CTTGGTACGA GGCGAGCTAC
GGCTTCTTCT TCTCTGCCTT CAGCGCAGCC ACCCTGTTTG CGATTCTCGG CTACTTCTTG
AGGTTCAAGC GATCAGGTCG AAGCATGCTC GATCGGATGC AAGCGGAAGC CTACGGCATG
TTTCTGGTAC ACTACCCGAT CGTCCTTTGG CTCCAGTACT GGCTATTCGA CTTCGAGATG
CCTGCAATCG CCAAGGCGAC GGTGGTGTTC GTACTCACGG TGGTATCTAG CTGGGCTGTA
ACAGGTATTT TGCGTAAGAT TCCGGGAGCG GCGCGGGTGC TCTGA
|
|---|
| Protein sequence | MRMTSHAATP TDAEAIPNLN TRNVALDRVR TFLTLVVLLH HAVIPYTYFG QTDAKSWIGF
DAIILATDSF FMAMFFFLSG LFVWPSLADK EAEKFLRDRL LRLALPFALA ALTVIPIAYF
AIALRRSPGT TFAVFWWKTI TVGPWPSGPV WFAWVLLAFD LTASVLYRVS PNLVDPINRL
SLRGCGRPTD FFIFLLVMTA MLYIPMRIYF GPGRWFEFGP FSVQASRVLL YPAYFMIGVG
VGAANLHRGL LSMDGRLAKN SWVWAVAALA PYCLLWALIF VKRGMLENPV WLPAWYEASY
GFFFSAFSAA TLFAILGYFL RFKRSGRSML DRMQAEAYGM FLVHYPIVLW LQYWLFDFEM
PAIAKATVVF VLTVVSSWAV TGILRKIPGA ARVL
|
|---|
| |