| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1094 |
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| Symbol | |
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| ID | 6408750 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1159954 |
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| End bp | 1160619 |
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| Gene Length | 666 bp |
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| Protein Length | 221 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642711000 |
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| Product | RNA polymerase, sigma-24 subunit, ECF subfamily |
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| Protein accession | YP_001990117 |
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| Protein GI | 192289512 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTCATCAA CACGGGACAG AGGAGTGATT TCGGCGAACG CTTCCCCACT CGCGACCGCC
TCGGATCGCG CGGTGCGGGC GGCCCTGGTG GAGGGCTACG ATCGGCTCCG GAACTATCTG
CAGAAGCACT TTCGTACGCC GAACGAGGCG GAAGAGGTCC TGCAAACGTT CGTTTTGCGG
GCCTTGGAAC GCTCGGCCGC CATTCGCGAT GCGGATTCGG TGCGTGGGTG GCTTAGTCGA
GTTCTGGCGA CTACCATAGC CGACTTCCAT CGGCAGACCT CGAAGAGAAG GGCGAGGGAA
GTCGAGTTTG CCGTTGAATT GTACGATCGC CTCGTCGCCG ATCAACGTGG CGAACTGGAC
TGGGCGGCGT GCGAATGTGT TCATGCTTAT CTACCCTTGC TGAAGACGGA ACACTCCGAG
GCGATCAAGA GAATCGACCT AGGTGGGGAG CAGAGGGAGG CGGTCGCAGC CGAGCTCGGC
GTGACCGTGA ATAACCTCAC CGTGCGCCTT CACCGCGCGC GCCAGGCTTT GAAGGAGCGG
CTCGAAGGCT CGTGTGCGGG CTGTGGGGAG GAAAGCTTCT TCGAATGCCG ATGCGGCGAC
CACGAACGGA ATATCCACTC TGGATTCGAG CTCCAGCCGA ATGGCCGCAA CGAAAAACGA
TCATGA
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| Protein sequence | MSSTRDRGVI SANASPLATA SDRAVRAALV EGYDRLRNYL QKHFRTPNEA EEVLQTFVLR
ALERSAAIRD ADSVRGWLSR VLATTIADFH RQTSKRRARE VEFAVELYDR LVADQRGELD
WAACECVHAY LPLLKTEHSE AIKRIDLGGE QREAVAAELG VTVNNLTVRL HRARQALKER
LEGSCAGCGE ESFFECRCGD HERNIHSGFE LQPNGRNEKR S
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