| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1091 |
|---|
| Symbol | |
|---|
| ID | 6408747 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | + |
|---|
| Start bp | 1157668 |
|---|
| End bp | 1159050 |
|---|
| Gene Length | 1383 bp |
|---|
| Protein Length | 460 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 642710997 |
|---|
| Product | multicopper oxidase type 3 |
|---|
| Protein accession | YP_001990114 |
|---|
| Protein GI | 192289509 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG2132] Putative multicopper oxidases |
|---|
| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTATCTC GAAGAAGCTT TCTTGGTAGC GCAACTGCAC TAGCGAGCGC GAGCGTCGTT
GCTGGACGCG TTCAGGCAGC GAGCATTCCC GAAGCGCCAA CGATGGACAA GGTGACGAGT
CAGCCGCCGC TCTATCCCAC GAGCGGACCG GAATATCGCC CCGTCGTCAC CCTGAACGGT
TGGTCGCTGC CGTGGCGAAT GAACGGAGAC TGGAAGGAAT TCCATCTGGT CGCGGAACCA
GTCGTCCGCG AATTTGCGCA AGGCATGAAC GCCCATCTGT GGGGTTACAA CGGCCAGACT
CCGGGACCCA CGATCGAGGC CGTCGAGGGC GACAAGGTAC GCATCTTCGT TACGAACAAG
CTCCCGGAAT ACACCACCGT TCACTGGCAC GGCATGATCC TGCCGTGCGG CATGGATGGG
GTCGGAGGTT TGACTCAGCC GCACATCAAT CCAGGCAAGA CATTCGTCTA CGAATTCGAG
CTCAAGCACA GCGGCACCTT CATGTACCAC CCTCACGCGG ACGAAATGGT CCAAATGGCG
ATGGGGATGA TGGGAATGTT CGTGGTCCAT CCGAAGGACC CGAGCTTCCG ACCGGTCGAC
CGCGACTTCG TCTTCGTCAT GAGCAGTTAT GACATGGATC CGGGGACCTA CGTGCCGAAG
GTCACCGAGA TGACCAACTT CAATATGTGG TCGTGGAACG CCCGCGTCTT TCCCGGCATC
GATCCGCTGC CGGTGAGACT CGGAGATCGG GTGCGCGTGC GCATCGGCAA TCTTACGATG
ACCAATCACC CAATTCATCT TCACGGCCAT AGCATTTCGG TGAGCGGCAC GGATGGAGGG
TGGGTGGCGG AAAGCGCGCG TTGGCCGGAG ACCACGATAG ATGTCCCGGT CGGATCCATT
CGCGCTTTCG AGGTCGTCGC TGACAATCCC GGCGATTGGG CTTTTCACTG CCATAAGTCG
CACCACACGA TGAACTCGAT GGGACACGAC CTCAGAACTC TGATCGGCGT GTCGAAGAAG
GACATCGCAA AGGCGGTGAA GAGGCTGGCG CCGGATTCGA TGGCGATGGG CTCCACTGGA
ATGGCCATGG GCGAGATGGA GATGCCGCTT CCTGACAACA CGCTGCCCAT GATGACCGGA
TCAGGTCAGT TCGGCCCGAT CGAAATGGGC GGAATGTTCA CGGTCATGAA GATTCGGGAG
GGGATGGCGC GCGACGACTA CAGCGATCCG GGACCGTACA AGTTCCCGAA GGGTACCGTT
GCGTATCAGG TCGAAACTCC GGCCGAAGAG CCGGCGCGTC AAGATGGTCC ATCGAAGAGC
GAGGGCACCA GGGAAAAGAA AAGTACGAAA GGGATGAAGA GCACGAAGAG CAAGGGGGCA
TGA
|
|---|
| Protein sequence | MLSRRSFLGS ATALASASVV AGRVQAASIP EAPTMDKVTS QPPLYPTSGP EYRPVVTLNG
WSLPWRMNGD WKEFHLVAEP VVREFAQGMN AHLWGYNGQT PGPTIEAVEG DKVRIFVTNK
LPEYTTVHWH GMILPCGMDG VGGLTQPHIN PGKTFVYEFE LKHSGTFMYH PHADEMVQMA
MGMMGMFVVH PKDPSFRPVD RDFVFVMSSY DMDPGTYVPK VTEMTNFNMW SWNARVFPGI
DPLPVRLGDR VRVRIGNLTM TNHPIHLHGH SISVSGTDGG WVAESARWPE TTIDVPVGSI
RAFEVVADNP GDWAFHCHKS HHTMNSMGHD LRTLIGVSKK DIAKAVKRLA PDSMAMGSTG
MAMGEMEMPL PDNTLPMMTG SGQFGPIEMG GMFTVMKIRE GMARDDYSDP GPYKFPKGTV
AYQVETPAEE PARQDGPSKS EGTREKKSTK GMKSTKSKGA
|
|---|
| |