| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1090 |
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| Symbol | |
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| ID | 6408746 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1156204 |
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| End bp | 1157655 |
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| Gene Length | 1452 bp |
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| Protein Length | 483 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642710996 |
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| Product | outer membrane efflux protein |
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| Protein accession | YP_001990113 |
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| Protein GI | 192289508 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1538] Outer membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATGC CGCTAACCGC TCGATCCGGC CTTTCTCATC ACCGAGCCCG CACGACGCTC
GGCGTATTGT CGATGTCGAT GTTGCTCGCC GGGTGCGCAG CCTTTTCCCC CGATGCCGGC
ATGTCAGGCG TCGCCGACAT TGCCGCGAGG ACCATCACGA AGGATGTAGT TGCGATCCGC
TCGATCGAGG ACGTCGAGCG GGTTAACGTG GCGGTCTCGG CACTGCTGCG GCGAAGCCTG
ACCGTCGACG CTGCGGTTCA GGTAGCATTG TTGAACAATC GTGGCCTGCA GGCTGCCTAC
AATGAGCTCG CACTGGCGGA AGCGGACTCC ATCAGCCAAA GCCTGCCTCC GAACCCGACG
TTTTCTCTCT CCAGAATCGC CGGAAATGGG GGGAGTGAGA TCGAGGGCCA GATCGTTGGC
GATATCCTCG CGCTCGCGAC GTTGCCGTTT CGTACGGAGA TCGCGCGTGA ACGTTTCCAC
CAAGCTCAAT TGCGCGCGGC TCTGGAAACA CTACGGCTCG CCGCTGACGT CAGACGAGCA
TATTACCAGG TGGTGGGTAC GAACGAACTG GTCGGACTTC TGGCCGAGAC TAAGACCACT
GCCGAGACGA TCGCTCAGCT CGCGGAAAAG CTTGGACAGA CCGGCTCGCT CAATAAGCTC
GATCAAGCGC GCGAACAGGT ATTTTACGCC GAGATCACTA CCGACCTCGC TACCGCGCGG
CAACGCGCTG CATCCGAGCG CGAGCGGATC GCAAGACTGC TCGGTGTTTG GGACGGTCAA
CTCGATTTCA AGCTGCCCAA GGTTCTTCCG GCCCTGCCGC GCAGCCCGAG GCCGTTACCC
AACATCGAAG TCGAGGCCGT CAGCCGTCGC GTCGATCTTC AGATGGCCCG CATCGAACTC
GGAACGTTGG CCAAGGCTCT CAATCTCACC GAGGCGACCC GCTTCGTTAC GTTGCTCGAC
GTCGCCGGCA TCTCCCGGAA GACCAAGGAC CCCGAAAGCC CCGCCTTCCG CGAGCGAGGA
TTCGACGTCC AATTTCAGAT ACCGATCTTC GATGGGGGCG AGGTTCGCGT CCGCCAGGCC
GCTGAAATCT ACAACAATGC ATTTAATCGC CTGACCGAGA AGGCGGTCAA CGTGCGTTCC
GAGGCACGTG ATGCGTACCG CGTCTATCGC TCCACTTACG ATATCGCCGG CCACTACCAG
CGGGAAGTGG TGCCGCTCCG GAACATCATC TCCGATGAAG CTCAACTGCG CTACGGCAGC
ATGCAGATCG ACGTGTTCGC GCTTCTCGCG GAAGCGAAGC TGAGAATCTC GGCCCAACGA
GCATCGATCG AAGCCAAACG CGATTTCTGG TTGGCGCAGT CGGAACTGCA GACCGCAGTC
AACGGCGGAG GCCGCTCCGA CAGTCAACAG GAGAGCCGTT CACCAACCAA TTCGCTGGCA
AACGGCGGAT AA
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| Protein sequence | MKMPLTARSG LSHHRARTTL GVLSMSMLLA GCAAFSPDAG MSGVADIAAR TITKDVVAIR
SIEDVERVNV AVSALLRRSL TVDAAVQVAL LNNRGLQAAY NELALAEADS ISQSLPPNPT
FSLSRIAGNG GSEIEGQIVG DILALATLPF RTEIARERFH QAQLRAALET LRLAADVRRA
YYQVVGTNEL VGLLAETKTT AETIAQLAEK LGQTGSLNKL DQAREQVFYA EITTDLATAR
QRAASERERI ARLLGVWDGQ LDFKLPKVLP ALPRSPRPLP NIEVEAVSRR VDLQMARIEL
GTLAKALNLT EATRFVTLLD VAGISRKTKD PESPAFRERG FDVQFQIPIF DGGEVRVRQA
AEIYNNAFNR LTEKAVNVRS EARDAYRVYR STYDIAGHYQ REVVPLRNII SDEAQLRYGS
MQIDVFALLA EAKLRISAQR ASIEAKRDFW LAQSELQTAV NGGGRSDSQQ ESRSPTNSLA
NGG
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