Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_1074 |
Symbol | |
ID | 6408730 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 1139704 |
End bp | 1140531 |
Gene Length | 828 bp |
Protein Length | 275 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 642710983 |
Product | transposase IS4 family protein |
Protein accession | YP_001990100 |
Protein GI | 192289495 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG3293] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCATGGA CCAAGATCAC TCGAGCGCAG TATCGGCGCG ACGGGCTGCG CTACGCAAGC GACCTGACGG ATGCGGAGTG GGCGTTGATC GCCCGGCGAA TGCCGCCGCG ACAACGTTTG GGACGGCCTC GCAGGGTCGA TCTGCGGCGC GTGGTTGAAG CGATCCTGTT CATCGCTTCC ACCGGCTGTC AGTGGCGCGC GCTGCCGAAG GAGTTCCCGC CCTATTCGAC GGTACAAGGC TATTTCTATA GCTGGCGCGA TAGCGGGCGT TGGCAAAGGA TCTTCGCCGC GCTGGTTCGC CGCGCGCGAC GACAACTCGG CCACAAGCCG ACGCCGACTG CGGCGGTGAT CGACAGCCAG AGCGTGCCGA CCACCCAAGC CGGCGGTCCG CGCGGATACG ACGCCGGCAA GCGCGTCTGC GGGCGCAAAC GCCACATCGT CGTCGACACC AACGGCCTGT TGCTCGCTGT GCACGTTCAC CCTGCCAACG TGCAGGACGG TCATGGTGCC GTGGCGCTGC TCACGGCCAT GCGCCGTTGT TTCCCGCGAT TGCGCCATGT CTTTGCCGAT CGTATTTATC ACGGCAATCA GCTTCTCACC GCGCTGGCGC CCTGCGGGCC GTGGACCATC GAAATCGTCG AGCGGCCCGC CGGCGTCAAA GGCTTTCAGC TGTTGCCGCG GCGCTGGGTA GTCGAACGCA GCTTCGCCTG GCTCGGCCGA TGTCGCCGCC TCGCCAAGGA CTTCGAAGCT TCCGCCGCAA CCGAATGCGC CTGGCTGCAC GTCGCCCATC TTCGACTGCT TCTCAGACGC CTCGCAAAAC CCACATGA
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Protein sequence | MPWTKITRAQ YRRDGLRYAS DLTDAEWALI ARRMPPRQRL GRPRRVDLRR VVEAILFIAS TGCQWRALPK EFPPYSTVQG YFYSWRDSGR WQRIFAALVR RARRQLGHKP TPTAAVIDSQ SVPTTQAGGP RGYDAGKRVC GRKRHIVVDT NGLLLAVHVH PANVQDGHGA VALLTAMRRC FPRLRHVFAD RIYHGNQLLT ALAPCGPWTI EIVERPAGVK GFQLLPRRWV VERSFAWLGR CRRLAKDFEA SAATECAWLH VAHLRLLLRR LAKPT
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