| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1072 |
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| Symbol | |
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| ID | 6408728 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1136895 |
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| End bp | 1139162 |
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| Gene Length | 2268 bp |
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| Protein Length | 755 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642710981 |
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| Product | heavy metal translocating P-type ATPase |
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| Protein accession | YP_001990098 |
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| Protein GI | 192289493 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCCATCG ATCCTGCGAC AACGCAACAT AAGATCGAAC GGACAGGTGA AACCGTTTAC
TTCTGCTCAG ATCGTCGTCG AACCGAATTC CTCGATGACC CCGAAAGCTA CGCTAGGTTA
CCGTCGAAGA CGGCCAATTC TGTGACGGTG CCAGAGGGTG AAATCTACAC TTGCCCGATG
CACCCGCAGA TTCGGCAACC AGGGCCTGGC AATTGTCCGA TCTGCGGCAT GGCCCTGGAG
CCGGAGATCG CGACGGCAGA GACACGCGCC AATCCCGAAT TGGCCGACAT GGTGCGGCGC
TTCTGGCTCG GCCTAGCGTT ATCTGCTCCG GTGGTGGCGC TCGAGATGGG GGGGCACCTT
ATCGCTGGTC ATGGTTGGAT TGATCAGACG CTTTCAAACT GGATTCAACT TCTTCTCGCA
ACACCAGTTG TACTTTGGGC CGGCTGGCCC TTCTTCGCCC GCGGTTGGCG ATCCATCCTG
AGCCGAAACC TCAACATGTT CACCTTGATC GCGATGGGAA CAGGCGTCGC TTGGATCTAC
AGCGTCGTTG CCACCCTAGC TCCTACGGTA TTCCCTTCGA CGTTCCGCGG GCATGACGGC
GCTGTTGCTG TATATTTCGA GGCAGCGGCG GTCATTACTG TGCTCGTCCT TCTCGGACAG
GTGCTCGAAC TGCGGGCTCG CGAGGCGACC TCCGGCGCGA TCAAGGCACT CCTCGATCTT
GCTCCCAAGA CAGCGCGGCG TGTGCGTTCC GATGAAGCCG ATGAGGAGGT GCAGATTGCG
GTGCTTCAGC CGGGTGATCG ACTACGCGTA CGCCCCGGCG AGAAGGTTCC TGTCGATGGT
GAGATTGTGG AGGGCCGCTC CTCCCTCGAT GAATCCATGG TCACTGGCGA ATCCATGCCT
GTCAGCAAAG ACATCGGCGG CAAGGTGATT GCCGGTACAC TCAATCAATC CGGCGGCTTC
ATCATGCAAG CGGACAAGGT TGGCAACGAT ACGATGTTGG CGCAGATCGT CCAAATGGTT
GCACAGGCGC AGCGATCCCG CGCACCGATC CAACGCCTTG CCGACCAAGT CGCAGGCTGG
TTCGTGCCTG CCGTCATAGG GGTCGCCTTC GCCGCATTCG CCGCCTGGGC TGCCTACGGC
CCCGAACCTC GCTTTGCGTT CGGCATCGTT GCGGCAGTCA GCGTGCTGAT CATCGCATGC
CCGTGCGCGC TCGGACTTGC AACGCCGATG TCCATCATGG TGGGCGTTGG GCGCGGCGCG
CAGGTCGGCG TGCTGATCAA GAACGCGGAA GCGCTGGAAC GCATGGAGCG CATCGACACC
CTAGTGGTGG ACAAGACCGG CACTCTGACG GAGGGCAAGC CTAAGGTTGT CGCTGTGGTG
CCTGCCATTG GCACTACCGA ACTTGAGTTA CTGCGCCTCG CTGCAAGCGT GGAGCGTGCC
AGCGAGCATC CCTTGGCGGC CGCGATCGTT GCCGAAGCAA AGCAACGTGG TATCCAGACG
AGCGACGTCC GTAATTTCGA TGCGCAGGCC GGGAAGGGCG CGGTTGGTAT AGTCGAAGGG
CGGAAAGTGC TCATCGGGAA CGTTGCCTTC ATGGGGGGCA ACGGCGTAGA GACATCCGCG
CTTTCGGCTG AAGCTGAACG TCAGCGTGGC GACGGGGCGA CTGTTATTAA CGTCGCCATC
GATGGCCAGT TGGCCGGCAT CTTGGCCATC GCCGATCCCG TCAAACAAAC CACCCCCGAG
GCGCTGCGAG ACCTCGCCGA CGAAGGCGTC AGGGTGATCA TGCTGACCGG AGACAACCGA
ACGACCGCGG AGGCGGTTGC CGGGCGGCTG GGCATTGCCG AAGTCGAGGC GGAAGTATTG
CCCGATCAGA AGAGCGCCGT CGTCGCTAGG CTGAAGGGGG AGGGCCGGGT GGTTGCGATG
GCAGGCGACG GCGTGAACGA TGCGCCTGCG CTCGCTCTAG CGGAGGTCGG AATTGCCATG
GGGACGGGTA CCGACGTTGC GATGGAGAGC GCCGGGATAA CTTTGCTCAA GGGAGATTTG
ACCGGCATCG TGCGCGCGCG GCGCCTGTCG CGCGCGACGA TGAGCAACAT CCGCCAGAAC
CTCTTCTTCG CCTTCGCCTA CAATGCCGCG GGTATCCCGA TCGCAGCTGG CGTCCTCTAT
CCCACTTTCG GCCTGCTGCT GTCGCCCATC ATCGCTGCCG CGGCCATGGC GCTTTCTTCG
GTCAGCGTTG TAGGGAACGC GCTTCGGTTG CGGGTGGCGA GAATTTGA
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| Protein sequence | MSIDPATTQH KIERTGETVY FCSDRRRTEF LDDPESYARL PSKTANSVTV PEGEIYTCPM
HPQIRQPGPG NCPICGMALE PEIATAETRA NPELADMVRR FWLGLALSAP VVALEMGGHL
IAGHGWIDQT LSNWIQLLLA TPVVLWAGWP FFARGWRSIL SRNLNMFTLI AMGTGVAWIY
SVVATLAPTV FPSTFRGHDG AVAVYFEAAA VITVLVLLGQ VLELRAREAT SGAIKALLDL
APKTARRVRS DEADEEVQIA VLQPGDRLRV RPGEKVPVDG EIVEGRSSLD ESMVTGESMP
VSKDIGGKVI AGTLNQSGGF IMQADKVGND TMLAQIVQMV AQAQRSRAPI QRLADQVAGW
FVPAVIGVAF AAFAAWAAYG PEPRFAFGIV AAVSVLIIAC PCALGLATPM SIMVGVGRGA
QVGVLIKNAE ALERMERIDT LVVDKTGTLT EGKPKVVAVV PAIGTTELEL LRLAASVERA
SEHPLAAAIV AEAKQRGIQT SDVRNFDAQA GKGAVGIVEG RKVLIGNVAF MGGNGVETSA
LSAEAERQRG DGATVINVAI DGQLAGILAI ADPVKQTTPE ALRDLADEGV RVIMLTGDNR
TTAEAVAGRL GIAEVEAEVL PDQKSAVVAR LKGEGRVVAM AGDGVNDAPA LALAEVGIAM
GTGTDVAMES AGITLLKGDL TGIVRARRLS RATMSNIRQN LFFAFAYNAA GIPIAAGVLY
PTFGLLLSPI IAAAAMALSS VSVVGNALRL RVARI
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