| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1042 |
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| Symbol | |
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| ID | 6408698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1107714 |
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| End bp | 1110155 |
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| Gene Length | 2442 bp |
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| Protein Length | 813 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642710956 |
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| Product | copper-translocating P-type ATPase |
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| Protein accession | YP_001990073 |
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| Protein GI | 192289468 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG2217] Cation transport ATPase |
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| TIGRFAM ID | [TIGR01494] ATPase, P-type (transporting), HAD superfamily, subfamily IC
[TIGR01511] copper-(or silver)-translocating P-type ATPase
[TIGR01525] heavy metal translocating P-type ATPase |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAAGA TTACGCTCGA AGTCCGCGAT CTATTCTCGG TCCTTGGCGC ACATGGAATC
GAACGGCATC TACAGCATGT TACGGGTGTC GGTCGCGTGT CGGTTAATCC GGTTTCTGGC
TCGACGACCG TCATGTTCGA TCCGGAGAAG ACCAGCCCTG CTGCAATACA GGAAGCGATT
AGAAATTGTG GTTTTCATTG TGCGGGCGAA GCGCTGCCCA AGCACGTTTG CGAAAAGTCG
ACGCCGCCGA GTACTGGTCC GACGGTTCAG ACCAGCCAGC TCGAGCATGC GCATTCCCAA
ACGCATAGAG ATCGCGGCGA TACGGCGGCT CCCGGCATGA TGGCGGCCGA CGCGATGGCC
GAGCACAGGG TGCACGGCGG GGAAAGGAGC GATGCCATGG CGCATGAAAT GGGCCACGGC
GTCGGCATGG ACATGCAGGG CATGGTCCGC GACATGCGCA ATCGCTTCTG GATCGCGCTC
GTCTTTAGTC TGCCGATTTT CCTGTTCTCG CCGATGGGCA TGGACTTCAT TCAAATCCCG
CCACCATTCG GCCTGCGCCT GGACCTTGTT CTGTTCGTTT TGGCGAGCGC CGCCATCCTT
TACCCGGTCT GGCCATTCGT TGTTGCAGCT TACCGCGCAC TCCGCAGCGG GGTTGCAAAC
ATGGCCGTCC TGGTCGTCCT CAGCGTAGGC ACCGGCTATC TGTTTAGCGT TGGCTCGACT
TTCTTTTATG GCGGCCACCA GTTCTACGAA GCCTCGGCAA TTCTGCTCGT CTTCATCCTG
CTCGGACACT GGCTCGAAAT GCGTGCAAGG GCAGGGGCAT CTGAGGCGAT CCGCGCGCTC
ATGGATATGG CGCCGCCCAA GGCAACGGTG CTGCGGGTTG GCAAGGAATT CGAAGTACCC
ACCGCTGAGA TCATTTCCGG CGATACGGTC CTGATCAGAC CGGGCAACAA AATCCCGGTT
GATGGGACCG TGCTAGAAGG ATCGTCGCTG GTCGACGAGT CGATGCTCAC TGGGGAATCG
ATGCCAGTAG TCAAAAAGGT CGGCGATGCC GTGATCGGCG CGACCATCAA CAAGAGCGGT
GCGTTTCAGT ATCGCGCAAC CAAGGTCGGA GCAGACACGG CTCTCGCCCA GATCGTCAAG
CTCGTCCAGG AAGCTCAGAA CTCCAAGGCG CCGTCGCAAC TGCTCGCGGA TCGCGCCTCG
CAATGGCTGG TGCTGGCAGC GGTCGCCGTG GGCCTGCTTA CGTTCGTCAT CTGGTACTGG
TGGATCGGCC AGACGCTGCT GTTCGCACTC AGCCTGACGA TCACCGTCTT CGTGATCGCA
TGCCCCGATG CCCTTGGGCT GGCAACGCCG ATGGCGATCA TGGTCGGAAC CGGGCTCGGC
GCCATGAATG GCATCCTATT CAAAAATGCG TCGGCGCTGG AGGACGCTAC AAAATTGAAC
GTTGTCATCT TCGACAAGAC CGGTACGCTG ACGATGGGCC ATCCCGAGGT GGTGGATCTA
GCGATCGCTG CCGGCGCCTC CGAGGATCAA TTGCTATCTG CGGCCGCAGC GGTGGAAGCA
GGGTCGGACC ATCCTTTGGC CCAGGCCATC CTGCGCCGGG CCGCCAACGT GAAGGCACCC
AAGGCAACCG GGTTCAAGAA TGTCGAGGGC AAGGGCGCGC AAGCCGAGAT CGACGGCAAG
ATGGCATTGC TCGGCAATAA ACTGCTGATG ACTGAGAATA AGATCGATCG CGGCGAGCTC
GGCGCGAAAT CCGAGGAACT GCAGGGCGCC GGACGAACGG TCGTTCATCT CGCAGTAGGC
GGCAAGCTCG TGGGTTTGAT CGCCATCGCC GATGCGGTGA GACCGACGGC GGTGGAAGCG
GTCAAGGCGT TGCGTTCGCG GGGGGTCGAG GTCGCGATGT TGACAGGAGA TAATCAGGGT
ACGGCCGAGC GGATCGCAAA GAGTCTCGGG ATCGATAAAG TCTTCGCAAA TGTGTTGCCT
AGCGACAAGG CGGGCAAGGT CAAGGAACTC CAATCGCAAG GTAAAAAGGT CGGCATGGTC
GGCGACGGCG TGAACGACGC TCCGGCCTTG ACCCAGGCCG ATGTTGGCTT CGCAATCGGT
GCAGGCACTG ATGTCGCGAT GGAAAGTGCC GACATTGTGT TGATGAAGAG CGACCCTTAC
GATGTGGTCG GGGCCATCGA ACTCTCCCAT GCGACGCTCA GAAAAATGCA TCAAAACTTA
TGGTGGGCGG TCGGCTACAA CGTGATAGCC TTTCCGCTTG CCGCTGGCGT GCTGTATCCA
TTTCTGCTTG GGCCGAGCAT TGCTGCTCTT GCGATGTCCG GTAGTACGGC ATTGGTAGCC
ATCAATGCTC TGATGTTGAA GCGGACGAAG CTGACCGGCA TCCGCCGTCG GCGCGCGACT
TCTACCTCTG AAGCGATCAT CCCCGTCGCG GCGACGTCGT GA
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| Protein sequence | MTKITLEVRD LFSVLGAHGI ERHLQHVTGV GRVSVNPVSG STTVMFDPEK TSPAAIQEAI
RNCGFHCAGE ALPKHVCEKS TPPSTGPTVQ TSQLEHAHSQ THRDRGDTAA PGMMAADAMA
EHRVHGGERS DAMAHEMGHG VGMDMQGMVR DMRNRFWIAL VFSLPIFLFS PMGMDFIQIP
PPFGLRLDLV LFVLASAAIL YPVWPFVVAA YRALRSGVAN MAVLVVLSVG TGYLFSVGST
FFYGGHQFYE ASAILLVFIL LGHWLEMRAR AGASEAIRAL MDMAPPKATV LRVGKEFEVP
TAEIISGDTV LIRPGNKIPV DGTVLEGSSL VDESMLTGES MPVVKKVGDA VIGATINKSG
AFQYRATKVG ADTALAQIVK LVQEAQNSKA PSQLLADRAS QWLVLAAVAV GLLTFVIWYW
WIGQTLLFAL SLTITVFVIA CPDALGLATP MAIMVGTGLG AMNGILFKNA SALEDATKLN
VVIFDKTGTL TMGHPEVVDL AIAAGASEDQ LLSAAAAVEA GSDHPLAQAI LRRAANVKAP
KATGFKNVEG KGAQAEIDGK MALLGNKLLM TENKIDRGEL GAKSEELQGA GRTVVHLAVG
GKLVGLIAIA DAVRPTAVEA VKALRSRGVE VAMLTGDNQG TAERIAKSLG IDKVFANVLP
SDKAGKVKEL QSQGKKVGMV GDGVNDAPAL TQADVGFAIG AGTDVAMESA DIVLMKSDPY
DVVGAIELSH ATLRKMHQNL WWAVGYNVIA FPLAAGVLYP FLLGPSIAAL AMSGSTALVA
INALMLKRTK LTGIRRRRAT STSEAIIPVA ATS
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