| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1039 |
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| Symbol | |
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| ID | 6408695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1103274 |
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| End bp | 1104764 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710954 |
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| Product | Integrase catalytic region |
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| Protein accession | YP_001990071 |
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| Protein GI | 192289466 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4584] Transposase and inactivated derivatives |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0651609 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGGAGACGG TCGCTCGGAT TCGGCGTGAG CATTTTCTCA AGGGCAAGAC GATCAAGGAG
ATCGTCCGGG ACCTGAAGGT GTCGCGGAAC ACGGTCCGCA AAGTGCTGCG TTCCGGTGAG
ACGTCATTCG AGTATGAGCG CGAAGTTCAG CCGCGACCGA AGCTTGGGCG GTGGACGGCC
GAGCTGGATG AACTGCTCTC GACGAACGCC ACCAAGGCAG CTCGCGAGCA GTTGACGTTG
ATCCGGATCT TCGAGGAACT GCGCGGGCGC GGTTATGACG GCGGCTACGA TGCCGTGCGC
CGCTTCGCCC GGCGCTGGGC CAAGGAGCGC GGCCAGGCGA CGGCCGCAGC TTACGTACCG
CTGAGCTTCG CGCCGGGAGA AGCCTACCAG TTCGACTGGA GCCACGAGAT CGTCCTGTTT
GGCGGGGTGA CGACGATCGT GAAGGTCGCC CACGTCCGGC TCTGCCACAG CCGGATGTTG
TTCGTGCGGG CCTATCCGCG CGAGACCCAG GAGATGGTGT TCGACGCTCA TGACCGGGCG
TTCGCCTTGT TCAAGGGAAC CTGCGGACGC GGCATCTACG ACAACATGAA GACGGCGGTG
GAGACGATCT TCGTCGGCAA GGACCGTCTC TATAATCGCC GCTTCATGCA GATGTGCAGC
CACTACCTGA TCGAGCCGGT CGCATGCACG CCGGCGTCTG GCTGGGAGAA GGGTCAGGTC
GAGAACCAGG TCGGCCTGGT GCGTGAGCGA TTCTTCACGC CGCGGCTGCG TTTCAGGAGC
TACGACGAGT TGAACGCCTG GCTCACGGAC AAATGCATCG CCTACGCCAA AGCCCATCGC
CACCCAGAGC TGACCGAGCA GACGATCTGG GAGGTGTTCG AAGCCGAGCG ACCAAAGCTC
GTTCCCTATG CCGGCCGGTT CGATGGATTC CACGCGGTGC CGACCTCGGT CTCGAAGACC
TGCCTGGTGC GCTTCGACAA CAACAAATAC TCGGTCGCCG CCAGCGCGGT CGGTCGACCG
GTCGAGGTGC ATGCTTATGC CGACCGCATC GTCATCCGCC AGGACGGCCG CGTCGTTGCC
GAACATCCTC GCTCGTTCGG TCGCGGCGAG ACCACCTACG ATCCCTGGCA TTACGTTCCC
GTGCTGGCGC GCAAGCCGGG CGCCTTGCGC AACGGCGCGC CGTTCAAGGA TTGGGTGCTA
CCGGCAGCGA TGGAACGCGT CAGGCGCAAG CTTGCCGGTG TTGCCGACGG CAACCGGCAG
ATGGTCGATA TCCTCAATGC GGTGCTGACC GATGGCCTGG CGGCGGTCGA AGCCGCCTGT
GTCGAGGCGA TCGCGCACGG CGTCCATTCC GCCGACGTCA TCCTCAACAT CCTCGCTCGC
CGGCGCGATC CAGCGCCGCC GGCCAACATC CTCACCCCCG CGGCGCTGGC GCTGCGTTAC
GCGCCCATCG CCGATTGTGC CCGCTACGAC AACCTCCGGA GGATGGTCTG A
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| Protein sequence | METVARIRRE HFLKGKTIKE IVRDLKVSRN TVRKVLRSGE TSFEYEREVQ PRPKLGRWTA
ELDELLSTNA TKAAREQLTL IRIFEELRGR GYDGGYDAVR RFARRWAKER GQATAAAYVP
LSFAPGEAYQ FDWSHEIVLF GGVTTIVKVA HVRLCHSRML FVRAYPRETQ EMVFDAHDRA
FALFKGTCGR GIYDNMKTAV ETIFVGKDRL YNRRFMQMCS HYLIEPVACT PASGWEKGQV
ENQVGLVRER FFTPRLRFRS YDELNAWLTD KCIAYAKAHR HPELTEQTIW EVFEAERPKL
VPYAGRFDGF HAVPTSVSKT CLVRFDNNKY SVAASAVGRP VEVHAYADRI VIRQDGRVVA
EHPRSFGRGE TTYDPWHYVP VLARKPGALR NGAPFKDWVL PAAMERVRRK LAGVADGNRQ
MVDILNAVLT DGLAAVEAAC VEAIAHGVHS ADVILNILAR RRDPAPPANI LTPAALALRY
APIADCARYD NLRRMV
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