| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1025 |
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| Symbol | |
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| ID | 6408680 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1088648 |
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| End bp | 1090330 |
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| Gene Length | 1683 bp |
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| Protein Length | 560 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710939 |
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| Product | 5'-Nucleotidase domain protein |
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| Protein accession | YP_001990057 |
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| Protein GI | 192289452 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0737] 5'-nucleotidase/2',3'-cyclic phosphodiesterase and related esterases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.587673 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCAAGC TCCGCTCCCG CCTGGCCCTG CTCGCCACCG CCGCCGCGCT CACTGTCGCA
TTCGTGCCCG CACCGCGCGC GGCCGAATTG CTGCCGCCGC CGGTCGATCT GCGGATTCTC
GCGATCAACG ACTTCCACGG CAATTTGCAG CCACCGCCCG GCGGAATCGC GATTGACGAT
CCGGCCGATC GGACCAAGAA GATTCACGTC CCCGCCGGCG GCGCAGAACA TATGGCGACG
CTGGTGAAGG CGCTGCGCAA GGATCATCCC AACGCGATCT TCGTCGCCGC CGGCGATCTG
ATCGGCGCCA GCCCGTTTCT GTCGGCGATG TTTCACGACG AGCCGACCAT CGAGTCGCTG
TCGCTGATGG GGCTGGCGCT ATCCTCGGTC GGCAATCACG AATTCGACGA GGGCAAGACC
GAGCTGTTGC GGATGCAGAA CGGCGGCTGC CATCCGGTCG ACGGCTGCCA GGGGCCGCAT
CCGTTCAAGG GCGCGGCGTT CAACTATCTG GCCGCCTCCA CGGTCGAGAC CGCGACCGGC
AAGACGGTGT TTCCGCCCTA TGCGATCCGC AAGTTCAGCG GCGTGCCGGT GGCGTTCATC
GGGCTGACGC TGAAGAACAC GCCCAACATG GTGTCACCGC CGGGGGTCGC CGGACTGTCG
TTCAAGGACG AGGCCGAGAC CGTCAACGCC CTGATCCCGG AGCTGAAGGC CAAGGGCGTC
GAGGCGATCG TGGTGCTAAT CCATGAAGGT GGTTTTCCGA CCGGCGACTA CAACGAATGC
CCGGGCATCT CCGGCCCGAT CGTCGAGATC GTCAACAAGC TCGATCGCGC CGTCGACGTG
GTGATCAGCG GCCACACCCA CCGCGCCTAC ACCTGCCGGA TTGACGGCCG CCTCGTCACC
AGCGGCGACA AATACGGCAC CATCGTCACC GCGATCGACC TCAAGCTCGA TCCGACCACC
GGCGACGTGA TCAGTGCCGC CGCCAATAAC ACGATCGTCC GAACCGAAAC GCTGGCCAAG
GATCCGGCGC AGACCAAACT GATCGCCGCC TACGACAAAC TGGCCGGCCC GATCGCGGCG
CGGCCAGCCG GCTCGGTGAC CGCGGCGCTG TCGCGGATGC CGAACGCGGC CGGCGAAAGC
GTACTCGGCG ACGTCGTCGC CGATGCTCAG CTCGCCGCCA CCCTCGACAA GGACAAAGGC
GGCGCTGAGA TCGCGCTGAC CAATCCGGGC GGCGTCCGCT CCGATATCCT GGGCGGCGAA
GGCGGAGCAG TGACATTCGG CCAAGTGTTT GCCGCGCAGC CGTTCCGCAA TCAGCTGGTG
ACGATGACGC TGACCGGCGC TCAGATCAAG GCGGCGCTCG AACAGCAATG GGCTGAGCCG
GCGCGACCAC GCATTCTGCA GGTGTCGAAG GGCTTTCACT TCGCCTGGGA TGCTGCGGGC
GCCCCCGGCG GACGAATTCC GCCCGACAGG ATGACGCTGA ACGGAGCGCC GATCGACCCG
AACCGCACCT ATCGGGTGAC GCTCAACGCC TATCTGGCAG CCGGCGGCGA CGGCTTCACC
GTGTTCAAGG ACGGTGCTGC ACCGCAAACC GGCGTGTACG ACGTCGACGC GTTGTTCTCT
TATTTCAAGA CTCACAGCCC GGTGGTGGCG CCGCCGACCG ACCGGGTGAC GCGATTGAAT
TAA
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| Protein sequence | MIKLRSRLAL LATAAALTVA FVPAPRAAEL LPPPVDLRIL AINDFHGNLQ PPPGGIAIDD
PADRTKKIHV PAGGAEHMAT LVKALRKDHP NAIFVAAGDL IGASPFLSAM FHDEPTIESL
SLMGLALSSV GNHEFDEGKT ELLRMQNGGC HPVDGCQGPH PFKGAAFNYL AASTVETATG
KTVFPPYAIR KFSGVPVAFI GLTLKNTPNM VSPPGVAGLS FKDEAETVNA LIPELKAKGV
EAIVVLIHEG GFPTGDYNEC PGISGPIVEI VNKLDRAVDV VISGHTHRAY TCRIDGRLVT
SGDKYGTIVT AIDLKLDPTT GDVISAAANN TIVRTETLAK DPAQTKLIAA YDKLAGPIAA
RPAGSVTAAL SRMPNAAGES VLGDVVADAQ LAATLDKDKG GAEIALTNPG GVRSDILGGE
GGAVTFGQVF AAQPFRNQLV TMTLTGAQIK AALEQQWAEP ARPRILQVSK GFHFAWDAAG
APGGRIPPDR MTLNGAPIDP NRTYRVTLNA YLAAGGDGFT VFKDGAAPQT GVYDVDALFS
YFKTHSPVVA PPTDRVTRLN
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