| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1023 |
|---|
| Symbol | |
|---|
| ID | 6408678 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 1087279 |
|---|
| End bp | 1087530 |
|---|
| Gene Length | 252 bp |
|---|
| Protein Length | 83 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 642710937 |
|---|
| Product | exodeoxyribonuclease VII small subunit |
|---|
| Protein accession | YP_001990055 |
|---|
| Protein GI | 192289450 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1722] Exonuclease VII small subunit |
|---|
| TIGRFAM ID | [TIGR01280] exodeoxyribonuclease VII, small subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.143685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGAAG CCGCAACCAC CGATGTGAAA AAGCTCAGCT TCGAGCGCGC CCTCGAGGAA
CTCGAGACCA TCGTCAAGCG GCTCGAAGAC GGCAAGGTGC CGCTCGAGGA GTCGGTCACG
ATTTATGAAC GCGGTGAAGC TTTGAAGCGC CGCTGTGAGG ATCTGCTGCG GCAGGCCGAA
GCCCGCGTGG ACAAGATTAC CACCGACGCG CAGGGCGCTC CGACCGGCAC CGAGCCGCTG
GACGTGCAGT AA
|
|---|
| Protein sequence | MAEAATTDVK KLSFERALEE LETIVKRLED GKVPLEESVT IYERGEALKR RCEDLLRQAE
ARVDKITTDA QGAPTGTEPL DVQ
|
|---|
| |