| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1020 |
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| Symbol | |
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| ID | 6408675 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1083410 |
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| End bp | 1084150 |
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| Gene Length | 741 bp |
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| Protein Length | 246 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710934 |
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| Product | hemolysin A |
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| Protein accession | YP_001990052 |
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| Protein GI | 192289447 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1189] Predicted rRNA methylase |
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| TIGRFAM ID | [TIGR00478] hemolysin TlyA family protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCCAAGT CATCGGACTC CACGCCCCGC AAGCGCGCCG ATGTCGTGCT GGTCGAACGC
GGCCTGTTCG ACAGCCGTGC ACGGGCGCAG GCGGCGATCG AGGCCGGCCT CGTAGTCGCG
GATGGCAAAC CGGTGACGAA AGTCTCTGAG CCGATCGCGC TTGATGCCGT GCTCGAAGCG
CAGCCGGCGC ATCCGTGGGT GTCGCGGGGC GGCGTCAAGC TCGCCGGCGC GCTGGAGCGC
TACCTGATCG AGATCGAGGA TCACGTCTGC CTCGACGTCG GCTCCTCCAC CGGCGGCTTC
ACCGAGGTGC TGCTGGCGCA CGGCGCCGCG CTGGTGTTCG CGGTTGATGT CGGCCGCGAT
CAACTCCACG CTTCGCTGCG CGGCCATCCC AAGATCGTCT CGATGGAAGA GACCGACATC
CGAAAGCTCG AGGGCACGCG GCTGCCGCAG CGGCCGGACG TCGTGGTGAT CGATGCCAGC
TTCATCTCAC TGAAACAGGT GCTGCCCGCG GCGCTGTCGC TCGCCGCATC GCCGATGAGT
CTGCTGGCGC TGATCAAGCC GCAGTTCGAG GCGCCCTCGA AGCGCGGCAT CGTCCGCGAC
GCCAAGGTGC ACCGCGCGGT GTGCGACGAC GCCGTCGCCT TCGCCGCCTC GCTCGGTTGC
CGTGACATCG AGGTATTTGC CTCGTCGATC GCCGGCGGCG ACGGCAATGT CGAGTTCTTC
CTCGGTGCGA AGCGCGGCTG A
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| Protein sequence | MAKSSDSTPR KRADVVLVER GLFDSRARAQ AAIEAGLVVA DGKPVTKVSE PIALDAVLEA
QPAHPWVSRG GVKLAGALER YLIEIEDHVC LDVGSSTGGF TEVLLAHGAA LVFAVDVGRD
QLHASLRGHP KIVSMEETDI RKLEGTRLPQ RPDVVVIDAS FISLKQVLPA ALSLAASPMS
LLALIKPQFE APSKRGIVRD AKVHRAVCDD AVAFAASLGC RDIEVFASSI AGGDGNVEFF
LGAKRG
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