| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1019 |
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| Symbol | |
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| ID | 6408674 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1081923 |
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| End bp | 1083347 |
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| Gene Length | 1425 bp |
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| Protein Length | 474 aa |
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| Translation table | 11 |
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| GC content | 69% |
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| IMG OID | 642710933 |
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| Product | MATE efflux family protein |
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| Protein accession | YP_001990051 |
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| Protein GI | 192289446 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0534] Na+-driven multidrug efflux pump |
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| TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGCGCG CCATGACCGC ACCTGGTTCC AACATCGCCG CCGGCGCGCT TGCGCCGGCG
AAATCGTCTG CGTGGCGGAC AGAGCTGATC GAAACGCTGT GGCTCGCGTG GCCGATGGCG
CTGACCCAGC TCGGCCAGAT CGCGATGATG ACCACCGATC TGGCGCTGAT CGGCCGGCTC
GGCGATGCCG CCGTGGCCGC GGCGGCGCTG GCGCATTTCG TGCTGTTCTC GACCTTCACG
ATGGGGCTGG GTCTGGTCTC CGCGGTGACG CCGCTGGCCG CACAGGCGTT CGGCGCCCGC
GCGCCGCGTC AGGTGCGTGC TTCACTGCGC GTCGGCCTAT GGGCGGGCGT GATCGCCGGC
GTGCCGCTCA CCCTCGGCCA GCTCTATGGC GAAGAGCTGC TGGTCGCGCT CGGCCAAAAT
CCTGCGACCT CGCGGCTTGC CGGTGATTAC CTCGACGGGC TGGCATGGTC GCTGGTGCCG
GGCTGGCTGT TCATCGCGCT GCGCGGCTTG ATGGGCGCGG TGAACCGGCC CGAGCCGGCG
CTGTGGATCA TGCTGACCGC GATCCCGATC AACCTCGGCC TCGCTTACGT GCTGATCCAC
GGCTCGTTCG GCCTGCCGCG GCTGGAAATC TTCGGCGCCG GCCTCGCCAC CAGCATCGTG
TCGTGGGCGA TGTGTATCGC CGCCGCCGTG GTGTGCGTGA CGATGCGCCC GTTCCGGAAA
TACCAAGTGT TCGGCGAACT GTTCCGGTTC GACGGCGAGC TGATGCGCCG GCTGCTGCAG
CTCGGCCTGC CGATCTCTGG CGCTTCCGTG CTGGAATACG GAGTGTTCGG CGCCGCCGCG
CTGCTGATGG GCAAGTTCGG CACCACCGCA CTCGCCGCGC ATCAGATCGC CCTGCAGGTA
GCCGCGATCA TGTTCATGGT GCCGATGGGG ATCTCGGTCG CCGCTACGGT GCGGGTCGGC
CATGCGGTCG GCCGCGGCGA TCCGCCGTCC GCGCGACGCG CCGGCTTTGC GGCGATCGGC
CTCGGCTTCG TGTTCATGGC CGCGATGACC CTGCTGGTTG CGCTGACGCG GCATCAGATC
CCGCAGCTGT TCCTCGGCGA TTCCGACACC TCGATCGAAA CCGCGACGCT GACCGCGGCA
CTGCTGATCG TCGGCGCGAG CTTCTTCATT GCCGACGGCC TGCAGGTCGT CGCCAACGGC
GCACTGCGCG GCCGCAACGA CACCAAGGTG CCGCTGCTGT TCGCGGTGCT CGGGTTCTGG
GTGATCGGTT TTCCGTTCTG CTGGGTGCTC GGCTTCCACA CCGACCTCGG ACCGTTCGGT
GTCTGGATCG GGCTCGCGGT CGGCCTCGTC GTCTATGCGG CGCTGCTGGT GTGGCGATTC
CACCGGCTGA CGCGCGACGC GATGGCCGCG GCCGTCGCCG CCTGA
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| Protein sequence | MVRAMTAPGS NIAAGALAPA KSSAWRTELI ETLWLAWPMA LTQLGQIAMM TTDLALIGRL
GDAAVAAAAL AHFVLFSTFT MGLGLVSAVT PLAAQAFGAR APRQVRASLR VGLWAGVIAG
VPLTLGQLYG EELLVALGQN PATSRLAGDY LDGLAWSLVP GWLFIALRGL MGAVNRPEPA
LWIMLTAIPI NLGLAYVLIH GSFGLPRLEI FGAGLATSIV SWAMCIAAAV VCVTMRPFRK
YQVFGELFRF DGELMRRLLQ LGLPISGASV LEYGVFGAAA LLMGKFGTTA LAAHQIALQV
AAIMFMVPMG ISVAATVRVG HAVGRGDPPS ARRAGFAAIG LGFVFMAAMT LLVALTRHQI
PQLFLGDSDT SIETATLTAA LLIVGASFFI ADGLQVVANG ALRGRNDTKV PLLFAVLGFW
VIGFPFCWVL GFHTDLGPFG VWIGLAVGLV VYAALLVWRF HRLTRDAMAA AVAA
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