Gene Rpal_1014 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_1014 
Symbol 
ID6408669 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp1076213 
End bp1077220 
Gene Length1008 bp 
Protein Length335 aa 
Translation table11 
GC content64% 
IMG OID642710928 
Productglyceraldehyde-3-phosphate dehydrogenase, type I 
Protein accessionYP_001990046 
Protein GI192289441 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0057] Glyceraldehyde-3-phosphate dehydrogenase/erythrose-4-phosphate dehydrogenase 
TIGRFAM ID[TIGR01534] glyceraldehyde-3-phosphate dehydrogenase, type I 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCAGTCC GGGTCGCGAT CAATGGGTTT GGCCGTATCG GCCGCAACGT TCTGCGGGCG 
ATCTACGAGT CCGGTCGTAA GGATATCGAA GTCGTTGCGA TCAACGATCT CGGCCCGGTC 
GAGACCAATG CCCATCTGCT CCGCTTCGAC TCCGTCCACG GCCGCTTCCC GTTCGAGGTC 
AAGGTCGACG GCGACACCAT CGATGCCGGC CGCGGCAAGA TCAAGGTGAC GGCCATCAAG 
GATCCGTCGG CGCTGCCGTA CAAGGAAGTC GGCGTCGACA TCGCGCTGGA ATGCACCGGT 
ATCTTCACCG CGCGCGACAA GGCCGCCACG CTGCTGACCG CTGGCGCCAA GCGCGTGCTG 
GTTTCGGCTC CGTCGGACGG CGCTGACGCG ACCATCGTGT ATGGCGTCAA CCACGAGACC 
CTGTCCAAGG ACCACATGGT GGTTTCGAAC GGCTCGTGCA CCACGAACTG CCTGGCTCCG 
GTCGCCAAGG TGCTCAACGA CACCGTCGGC ATCGAAACCG GCTTCATGAC CACGATCCAC 
GCCTACACCG GCGACCAGCC GACGCTGGAC ACCATGCACA AGGATCTCTA CCGCGGCCGC 
GCTGCGGCGA TGTCGATGAT CCCGACTTCG ACCGGTGCCG CCAAGGCGAT CGGCCTGGTG 
CTGCCGGAGC TGAAGGGCAA GCTGGACGGC GTCGCGATCC GCGTGCCGAC CCCGAACGTC 
TCGGTGGTCG ACCTCAAGAT CATCGCCAAG AAGGCCACCA CCAAGGAAGA GATCAACGAA 
GCGATCAAGC GCGCCGCCGA GCAGGAGCTG AAGGGCATCC TCGGCTACAC CAACGCGCCG 
AACGTCTCGA TCGACTTCAA CCACGATCCG CACTCGTCCA CCTTCCACAT GGACCAGACC 
AAGGTGCAGA ACGGCACGCT GGTGCGCGTG ATGTCGTGGT ACGACAACGA GTGGGGCTTC 
TCCAACCGCA TGGCCGACAC CGCCGTCGCG ATTGGCAAGC TGATCTAA
 
Protein sequence
MAVRVAINGF GRIGRNVLRA IYESGRKDIE VVAINDLGPV ETNAHLLRFD SVHGRFPFEV 
KVDGDTIDAG RGKIKVTAIK DPSALPYKEV GVDIALECTG IFTARDKAAT LLTAGAKRVL 
VSAPSDGADA TIVYGVNHET LSKDHMVVSN GSCTTNCLAP VAKVLNDTVG IETGFMTTIH 
AYTGDQPTLD TMHKDLYRGR AAAMSMIPTS TGAAKAIGLV LPELKGKLDG VAIRVPTPNV 
SVVDLKIIAK KATTKEEINE AIKRAAEQEL KGILGYTNAP NVSIDFNHDP HSSTFHMDQT 
KVQNGTLVRV MSWYDNEWGF SNRMADTAVA IGKLI