| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1004 |
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| Symbol | |
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| ID | 6408659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1067016 |
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| End bp | 1067936 |
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| Gene Length | 921 bp |
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| Protein Length | 306 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710918 |
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| Product | peptidase U32 |
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| Protein accession | YP_001990036 |
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| Protein GI | 192289431 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 29 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAACTCA CGCTTGGACC GGTGCTGTTC AACTGGAAGC CGGAAGAGTG GCGCGACTTC
TATTTCCGCA TCGCCGACGA AGCGCCGGTC GACACCGTCG TGGTCGGCGA GGTGGTGTGC
TCGAAGCGCC AGCCGTTCCT TGAGGAGCAC ATTCCGGCGG TGGTCGAACG CCTCGCCGGC
GCCGGCAAGA AGGTGCTGAT GGGCTCGCTG GTGCTGATGT CGCTGCCGCG CGAGCGTAAG
GCGATGGGCG AGCTCGCCGC CGACGACGGC TTCATGATGG AGGTCAATGA CCTCTCCTGC
CTCGGCATGC TCGGCGGCAG GGCGCACGCG ATCGGTCCGT TCGTGAACAT CTACAACGAG
TCGACCGCGG CGTATTTCGC CTCGCGCGGC GCCAGCCGCA TCTGCCTGCC GCCGGAGCTG
CCGCTGTCGG CGATCCGCAG CATCGCCAAG TCGCTGCCCA ACGTGTCGTT CGAGGTGTTC
TCGTTCGGCC GGGTGCCGCT GGCGATCTCG GCGCGCTGCT ATCACGCCCG GCTCAACAAG
CTGGCGAAGG ACAATTGCAA GTTCGTCTGC GAGCAGGACC CCGACGGTCT CGCCGTGACC
ACGCTCGATG ACGAGCCGTT CCTGGCGATG AACGGCGTGC AGACGCTGTC CTACACCTGC
GCCAGCCTGC TCGGCGACAT CGACAAGCTC AAGGACGCCG GCGTTTCCTC GATGCGCCTG
TCGCCGCAGC AGTGCGACAT TGTGGCGGTC GCCAAGTTGT ATCGCGACGT CATCGACGGC
AAGATCGCCG TTGCCGAGGG CGCTCAGAAG CTCGACCAGC TCTACCCGCT GAAGAAGTCC
AACGGCTTCC TGTTCTCCAA GCCGGGCGCA GCGTTCGTGA CTGACAGCGG CGACGTGCGA
CGGATCGTGC CGGCGGCGTA A
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| Protein sequence | MQLTLGPVLF NWKPEEWRDF YFRIADEAPV DTVVVGEVVC SKRQPFLEEH IPAVVERLAG
AGKKVLMGSL VLMSLPRERK AMGELAADDG FMMEVNDLSC LGMLGGRAHA IGPFVNIYNE
STAAYFASRG ASRICLPPEL PLSAIRSIAK SLPNVSFEVF SFGRVPLAIS ARCYHARLNK
LAKDNCKFVC EQDPDGLAVT TLDDEPFLAM NGVQTLSYTC ASLLGDIDKL KDAGVSSMRL
SPQQCDIVAV AKLYRDVIDG KIAVAEGAQK LDQLYPLKKS NGFLFSKPGA AFVTDSGDVR
RIVPAA
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