| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1003 |
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| Symbol | |
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| ID | 6408658 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1065970 |
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| End bp | 1066947 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710917 |
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| Product | peptidase U32 |
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| Protein accession | YP_001990035 |
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| Protein GI | 192289430 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG0826] Collagenase and related proteases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGAACTGA TCTGTCCCGC TGGTACGCCG GCAGCGCTGC ATGATGCCGT CGCCGCAGGC
GCCGATGCGA TCTATTGCGG TTTCAACGAC GAAACCAACG CGCGCAACTT CCCGGGGCTG
AACTTCAGCC GCGAGGAGAT GCGTGAGTCG ATCGCGCACG CGCATCGCTA CGGCACCAAG
GTGCTGGTGG CGATCAACAC CTTCGCCCGC GCCGGCAATG TCGAGCTGTG GCAGCGCTCG
GTCGACGATG CGGTCGAAGC CGAGGCCGAC GCGCTGATCC TCGCCGACGT CGGCGTGATG
GATTACTGCG CCAAGACCCA TCCAGAGCAG CGGCTGCACG TCTCGGTGCA GGCGGCTGCC
GCCAATCCGG ATTCGATCCG GTTCTATGTC GACAGCTTCA ACGCCCAGCG CGTGGTGCTG
CCGCGCGTGC TCAGCGTGCA GGAAATCGCC GCGATCACCA AAGAGGTGAA GGTCGAGACC
GAGGTCTTCA TCTTCGGCGG CCTGTGCGTG ATGGAGGAGG GCCGCTGCTC GCTGTCGTCC
TACGCCACCG GCAAGTCGCC GAACATGGAC GGCGTCTGCT CGCCGGCCGC CTCGATCCAG
TATCGCGAGC AGAACGGCTC GCTGGTGTCG CGGCTCGGTG AGTTCACCAT CAACAAATTC
GCCAAGGGCG AGGCTGCGGC GTATCCGACG CTGTGCAAGG GCCGCTACCA GACCGACGAA
GGCTGCGGCT ATCTGTTCGA AGACCCGGCC AGCCTCGATG CCACCACGAT GCTGCCGGAC
CTGCGCGCCG CCGGCGTCGC GGCGCTGAAG ATCGAAGGCC GCCAACGCGG CCGGGCCTAT
ATCGAGCGGG TGGTGAAGAC CTTCAAGGAC GTGCTCGCCG CGCTCGATGA CGGACGGCCG
CTGCCGGTCG ACGCACTGCG CGGCCTGACC GAAGGCCAAT CCACCACCAC CGGCGCCTAC
AAGAAGACTT GGCGCTGA
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| Protein sequence | MELICPAGTP AALHDAVAAG ADAIYCGFND ETNARNFPGL NFSREEMRES IAHAHRYGTK
VLVAINTFAR AGNVELWQRS VDDAVEAEAD ALILADVGVM DYCAKTHPEQ RLHVSVQAAA
ANPDSIRFYV DSFNAQRVVL PRVLSVQEIA AITKEVKVET EVFIFGGLCV MEEGRCSLSS
YATGKSPNMD GVCSPAASIQ YREQNGSLVS RLGEFTINKF AKGEAAAYPT LCKGRYQTDE
GCGYLFEDPA SLDATTMLPD LRAAGVAALK IEGRQRGRAY IERVVKTFKD VLAALDDGRP
LPVDALRGLT EGQSTTTGAY KKTWR
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