| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_1000 |
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| Symbol | |
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| ID | 6408655 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 1063168 |
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| End bp | 1063770 |
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| Gene Length | 603 bp |
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| Protein Length | 200 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642710914 |
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| Product | 3-octaprenyl-4-hydroxybenzoate carboxy-lyase |
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| Protein accession | YP_001990032 |
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| Protein GI | 192289427 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0163] 3-polyprenyl-4-hydroxybenzoate decarboxylase |
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| TIGRFAM ID | [TIGR00421] polyprenyl P-hydroxybenzoate and phenylacrylic acid decarboxylases |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACGC AGCACCGCAT CGTGGTCGGC ATCAGCGGCG CCTCGGGCGC CGCGGTGGGG
CTGCGGGTGG TCGAACTGCT GGCCTCGGTC GATTGCGAAG TGCATCTGGT GGTGTCGAAG
GCCGCACGGC GGACGATCGC CTACGAGGTC GGGCCGAACG CGCTCGATCA CGCCGCCGAC
CTGGTGCATC GCTTCCATAA GATCGAAGAT GTCGGCGCCT GCATCGCCTC CGGCTCATTC
CGCACCTCCG GCATGATCGT GGCGCCGTGT TCGATCCGCA CGCTGTCGGC GATCGCCCAT
GGCGATCTCG ACAATCTGCT GGTGCGCGCC GCCGACGTGC AGCTCAAGGA GCGCCGACGG
CTGGTGCTGA TGCTGCGCGA AACACCGCTG CATCTCGGCC ATATCCGCAG CATGGCGCAG
GCAACCGAGA TCGGTGCCAT CGTGGCGCCG CTGTCGCCGG CGTTCTATCA GCGGCCGCGC
TCGATCTCGG AAATGATCGA CCACATGGCC CTGCGCGCGA TCGGGCTGCT CGGCCTGAAC
GATCTGGAAT TGTCGGCCCC CGAATGGTCC GACGATACCC CGCCGACCTG CCCGAAGCCC
TGA
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| Protein sequence | MSTQHRIVVG ISGASGAAVG LRVVELLASV DCEVHLVVSK AARRTIAYEV GPNALDHAAD
LVHRFHKIED VGACIASGSF RTSGMIVAPC SIRTLSAIAH GDLDNLLVRA ADVQLKERRR
LVLMLRETPL HLGHIRSMAQ ATEIGAIVAP LSPAFYQRPR SISEMIDHMA LRAIGLLGLN
DLELSAPEWS DDTPPTCPKP
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