Gene Rpal_0992 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0992 
Symbol 
ID6408647 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1057597 
End bp1058616 
Gene Length1020 bp 
Protein Length339 aa 
Translation table11 
GC content67% 
IMG OID642710906 
Producthypothetical protein 
Protein accessionYP_001990024 
Protein GI192289419 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTTCAG GCCCTTCCCC GCGCCAGGCG ATGGAGATCG AACTCGACAA GCTGTCGTCG 
CCGCGAATCT TCCTGGTGCG GATGCTGGTG TTCCTGGTGC TGTGCGCGCT GATCGTGGTG
GTGCTGTACA AGCAGATCCT GGCCGCCTTC ATGGCCAATC CGGGCCTCAA CGGCCTGATC
TGCGCGGTGC TGGTGATCGG CATCGTGCTG GCCTTCCGCC AGGTGATCCG GCTGTATCCC
GAGGTCGCCT GGGTCAACAA TTTCCGCATC AACGATCCAG GCCTCGCGCT CGACCGGCGG
CCGAGCCTGC TGGCGCCGAT GGCCGCGATG CTCGGCGGCG AGCGCTCGGG CCGAATCGCG
ATCTCGCCGC AGACGATGCG GCATCTGCTC GACTCGATCG CCACGAGGCT CGACGAAGCA
CGCGACATCT CGCGCTACAT GACCGGCCTG TTGGTCTTCC TCGGCCTGCT CGGCACCTTC
TGGGGCCTGA TCGAGACCGT CGGCTCGATC GGCGGAGTGA TCGGCAGCCT GAAAGTCACC
GGCGACGCCG GCTCGCTGTT CGACACGCTG AAGGAAGGCC TCGCCGCCCC GCTCGGCGGC
ATGGGGATTT CGTTCTCGTC GTCGCTGTTC GGCCTCGCCG GCTCGCTGGT CCTCGGCTTC
CTCGATCTGC AATCCAGCCA GGCGCAGAAC CGGTTCTACA CCGACCTCGA AGACTGGCTG
GCTTCGACGG TACGCGGCTC GGTGGACGAT GGCGCGCTCG CCGGCAGCGC GGATCTGCAG
GCCGCGCTGG AGCGGCTGCG GCTGACGCTG GAAGATGGCG GCGCCAACCG CGCCACCACC
GCCGCGATGG CCAACCTCGC CAATGCGATC CAGAGCCTGG TCGGGCACAT GCGCAACGAG
CAGCAGATGA TCCGCGAATG GGCGGACGCC CAGGGTGAGC AGAACCGCGA GATCAAGGAG
CTATTGTCCG CCCTGGTGAA CCGGCCCGAG AAGAGCCTGC GCGAGCCGGA GAAGAGCTGA
 
Protein sequence
MASGPSPRQA MEIELDKLSS PRIFLVRMLV FLVLCALIVV VLYKQILAAF MANPGLNGLI 
CAVLVIGIVL AFRQVIRLYP EVAWVNNFRI NDPGLALDRR PSLLAPMAAM LGGERSGRIA
ISPQTMRHLL DSIATRLDEA RDISRYMTGL LVFLGLLGTF WGLIETVGSI GGVIGSLKVT
GDAGSLFDTL KEGLAAPLGG MGISFSSSLF GLAGSLVLGF LDLQSSQAQN RFYTDLEDWL
ASTVRGSVDD GALAGSADLQ AALERLRLTL EDGGANRATT AAMANLANAI QSLVGHMRNE
QQMIREWADA QGEQNREIKE LLSALVNRPE KSLREPEKS