Gene Rpal_0991 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0991 
Symbol 
ID6408646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp1056572 
End bp1057597 
Gene Length1026 bp 
Protein Length341 aa 
Translation table11 
GC content67% 
IMG OID642710905 
Producthypothetical protein 
Protein accessionYP_001990023 
Protein GI192289418 
COG category[N] Cell motility 
COG ID[COG1360] Flagellar motor protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCTGG CCCGCGGCCG CAGGCAGGAG TCCGGCTTCA ACTACTGGCC GGGCTTCGTC 
GATGCGCTGT CGACGCTGAT CCTCGGCATC GTGTTCCTGC TCACGGTATT TCTGGTGGTG
CAGTTCTTCC TGTCGCAGGA GGTCACCGGC AAGGACAAGG CGCTGGCCGA GCTGAACGCC
AAGATCGCCC AGCTCAACGA CATCCTGTCG CTGGAAAAAC TCGGCAAGCT CAATCTGGAG
GAGCAGCTCG CGCAGATGCG CGCCGGGCTG TCGGCCGCCG AGAGCGAGCG TGACCGGGTC
AAGGGCCTGT ATGACGGCCT CGCCGGCGCC GGCAACGACG CCGCCGGTCG CGCCACCGAA
CTCAACAAGG CGCTGGATTC GGAAAAGCAG ATCTCGGCGC GCGCGCTGGC GCAGGTCGAG
GTGCTGAACC AGCAGATCGC CGCGCTGCGC CGCCAGCTCG CCGCGCTCGA AGAGGCGCTC
GACGCATCCG AGAAGCGCGG CAAGGAGTCC CAGAACAAGA TCGCCGATCT CGGCCAGCGG
CTGAACGTCG CGCTGGCGCA GCGGGTGCAG GAGCTGTCGC GCTACCGCTC GGAATTCTTC
GGCCGTCTGC GCGCCATCCT CGGCGACCGG CCCGACATCC GCATCGTCGG CGATCGCTTC
GTGTTCCAGT CCGAAGTGTT CTTCGACACC GGCCAGGCAC TGCTGCTGCC GGAAGGCCGC
GCCGAGCTCG ACAAGGTCGC CGACGCGCTG AAGGAGCTCG ACAAGAAGAT CCCGGCCGAG
CTGCCCTGGG TGGTGCGGGT CGACGGCCAT ACCGACAAGC GGCCGATCAC AGGCAGCTTC
AAGTCGAACT GGGAGCTGTC GAGCGCCCGC GCGATCTCAG TCGTGCAATA TCTGATGTCG
CGCGGCGTGC CGGCGCAGCG TCTGGTCGCC GCCGGCTTCG CCGAATTCCA GCCGCTCGAC
ACCGCCGATA CCGACGATGC CTACAAGCGC AACCGCCGGA TCGAACTGAA GCTGACGGAG
CGGTGA
 
Protein sequence
MALARGRRQE SGFNYWPGFV DALSTLILGI VFLLTVFLVV QFFLSQEVTG KDKALAELNA 
KIAQLNDILS LEKLGKLNLE EQLAQMRAGL SAAESERDRV KGLYDGLAGA GNDAAGRATE
LNKALDSEKQ ISARALAQVE VLNQQIAALR RQLAALEEAL DASEKRGKES QNKIADLGQR
LNVALAQRVQ ELSRYRSEFF GRLRAILGDR PDIRIVGDRF VFQSEVFFDT GQALLLPEGR
AELDKVADAL KELDKKIPAE LPWVVRVDGH TDKRPITGSF KSNWELSSAR AISVVQYLMS
RGVPAQRLVA AGFAEFQPLD TADTDDAYKR NRRIELKLTE R