Gene Rpal_0983 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0983 
Symbol 
ID6408638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1047184 
End bp1047837 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content63% 
IMG OID642710897 
Producthypothetical protein 
Protein accessionYP_001990015 
Protein GI192289410 
COG category[K] Transcription 
COG ID[COG1678] Putative transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGACTG CATCCAAAAG GCCGAAGTCC GGCGCAGCCA AGAAGCCCGC CGCAGCGAAG 
GTGCGCGGTG ATGGGCCGAG CTATCTCGAT GGCCAGCTCC TGATCGCGAT GCCAGTGATG 
GAAGATGAGC GTTTTGCGCG CTCGGTGATC TACATTTGCG CGCACTCATC GGAAGGCGCC 
ATGGGGATCA TCGTCAATCG CCCGGCGGGC AGCATCGATT TCCCCGAACT GCTGGTGCAG 
CTCGACATCG TCGAGAAGCC GGAGCAGATC AAGCTTCCCG ATCACGCCGA GTCCATGAAG 
GTGCTGAGGG GCGGACCGGT CGAGACCGGC CGCGGATTCG TGCTGCATTC GAGCGACTTC 
TTCATCAAGG ACGCGACACT GCCGATCGAT GACGGCATTT GTCTGACCGC CACCGTGGAC 
ATCCTCAAGG CGATCGCCGG CGGCACCGGC CCGAAGCACG CCATCCTGGC GCTCGGCTAT 
GCCGGCTGGG CGCCCGGCCA GCTCGAAAAC GAGATCCAGG AAAACGGCTG GCTGCACTGC 
GACGCCGATG CCGATCTGAT CTTCGGCGAT GACATCGAAG AAAAATACGA CCGCGCGCTG 
CACAAGCTCG GCATCGAGCC GGGGATGCTG TCAGCGGAGG CCGGGCACGC GTAG
 
Protein sequence
METASKRPKS GAAKKPAAAK VRGDGPSYLD GQLLIAMPVM EDERFARSVI YICAHSSEGA 
MGIIVNRPAG SIDFPELLVQ LDIVEKPEQI KLPDHAESMK VLRGGPVETG RGFVLHSSDF 
FIKDATLPID DGICLTATVD ILKAIAGGTG PKHAILALGY AGWAPGQLEN EIQENGWLHC 
DADADLIFGD DIEEKYDRAL HKLGIEPGML SAEAGHA