Gene Rpal_0969 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0969 
Symbol 
ID6408623 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp1036790 
End bp1037446 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content67% 
IMG OID642710883 
ProductLysine exporter protein (LYSE/YGGA) 
Protein accessionYP_001990002 
Protein GI192289397 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1280] Putative threonine efflux protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.013511 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCGTGG GAATGGGATT TGAGATGCTC GGCATTCACG ACTTCTGGCT GTTCGTCGCC 
TCCGGGCTGC TGCTCAATGT CACGCCCGGG CCTGACACAG CCTTCATCGT CGGCCGCGGC 
CTGCAGTTCG GCTGGCGGGG CGGCGCCGCT GCGGCGCTCG GCGTCGGCAC CGGCTGCCTG 
GTGCATGTCG CCGCCGCCGC TGCAGGACTG TCTGCTCTGC TGATGGCGTC GACGTTGGCG 
TTCAGCGTGC TCAAGTGGGT CGGCGCCGCC TATCTGATCT GGCTGGGGGC ACGGATGCTG 
CTGTCGAAGC CCAGCGATTT CACCACCAAC GCAGGCGCTG CCCCGACGCT GTCGATGCCC 
GCGGTGTTTC GCCAGGGCAT GCTCACCAAT GTGCTCAACC CCAAGGTGGC GCTGTTCTTT 
CTCGCCTTTC TGCCGCAGTT CGTCGCCGCC GATGCGCCCA ATAAGGCGCT GGCGTTTCTG 
GTGCTCGGGC TGATCTTCGT GGTCAACGGC ACGCTGTATT GCCTGGCGCT CGCGGCCTTC 
GCGGCGCGTG CGGCCGATCG GCTGCGCCGC TCCAGCACGG TGCTGCAATG GATCAATCGC 
GGCCTTGGCG CGCTGTTCGT CGCGCTCGGC ATCCGGGTGG CGCTGGCTCG CACTTGA
 
Protein sequence
MRVGMGFEML GIHDFWLFVA SGLLLNVTPG PDTAFIVGRG LQFGWRGGAA AALGVGTGCL 
VHVAAAAAGL SALLMASTLA FSVLKWVGAA YLIWLGARML LSKPSDFTTN AGAAPTLSMP 
AVFRQGMLTN VLNPKVALFF LAFLPQFVAA DAPNKALAFL VLGLIFVVNG TLYCLALAAF 
AARAADRLRR SSTVLQWINR GLGALFVALG IRVALART