| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0960 |
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| Symbol | gltD |
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| ID | 6408614 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 1025034 |
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| End bp | 1026488 |
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| Gene Length | 1455 bp |
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| Protein Length | 484 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710874 |
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| Product | glutamate synthase subunit beta |
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| Protein accession | YP_001989993 |
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| Protein GI | 192289388 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
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| TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.538211 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGCAAGG TCACGGGGTT TCTGGAAATC GAGCGGCACG ATCGCGTTTA TGCGCCGGTC
ACCGATCGGG TGAAGAACTA CAACGAGTTC GTGGTTCCGC TCAGCGAGAA AGACCTGCGC
GACCAGGCCG CCCGCTGCAT GAACTGCGGC ATCCCGTATT GCCACGGCAC CGGTTCGGCG
CAGCCGGGCG CGACGGGCTG TCCCGTCAAC AACCAGATCC CCGACTGGAA CGACCTGGTT
TACAACGGCT ATTGGCAGGA GGCCGCGCGC ACCCTGCACT CGACCAACAA CTTTCCGGAA
TTCACCGGCC GGATCTGCCC GGCGCCGTGC GAAGCGTCGT GCACGCTGAA CATCGACGAC
AACCCGGTCA CCATCAAGAC GATCGAATGC GCGATCGTCG ACACCGCATT CGACAACGGC
TGGGTCACGC CGGAGATTGC GGCGGTCAAG ACTGGCCAGA GCGTCGCGGT CGTCGGTGCC
GGCCCGGCGG GCCTCGCCTG CGCCCAGCAA TTGGCGCGCG CCGGCCACGA CGTCCACGTC
TATGAGAAGT TCGCCAAGGC CGGCGGCCTG CTTCGCTACG GCATCCCGGA CTTCAAGATG
GAGAAGCATC TGATCGACCG CCGCGTCGCC CAGATGGAAG CCGAAGGCGT CACCTTCCAC
TATGGCGCGC CGGTTGGCGG CAGCACTCCG GGTGCGGTCG ATCCGGCCGA GCTGCTCAAG
CAGTACGACG CCGTCGCGCT GACCGGCGGT GCCGAAGCGC CGCGCGATCT GCCGATCCCG
GGCCGAGAGC TCGGCGGCAT CCATTTCGCG ATGGACTTCC TCACCCAGCA GAACCGCCGC
GTCTCCGGCG AAGCGGTGAA CGGCACCGAC ATTCTGGCCG CCGGCAAGAA CGTGGTGGTG
ATCGGCGGCG GCGACACCGG CTCGGACTGC ATCGGTACCT CGATCCGTCA GGGCGCCAAG
TCGGTGACCC AGATCGAAAT CATGCCGGCG CCGCCGGAGC GTGAGAACAA GGCGCTGACC
TGGCCGAACT GGCCGATGAA GATGCGCACC TCCTCGAGCC AGGCCGAAGG CGCCGCGCGC
GAATTCGCCG TGATGACGCA GTCGTTCGAA GGCGAGGGTG GCGTCGTTAA GAAGCTGAAC
TGCGTCCGCG TCGACGCCAA GTTCCAGCCG ATCCCCGGCA CCGAATTCGT GCTGGAAGCC
GACCTCGTGC TGCTGGCGAT GGGCTTCGTC TCGCCGGTGA AGGAAGGACT GCTGACCCAG
CTTGGCGTCG CGCTCGACCC GCGCGGCAAC GTTGCCGCTG ATCTTGCGCA CTTCACCACT
TCGGTCGACA AGGTGTTCGC CGCCGGCGAT ATGCGTCGCG GCCAGTCCCT GGTCGTGTGG
GCGATCCGCG AAGGGCGCCT CTGCGCCCAG GCGATCGACC GGTTTTTGAT GGGCGCGACG
ACGCTGCCGC GGTAA
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| Protein sequence | MGKVTGFLEI ERHDRVYAPV TDRVKNYNEF VVPLSEKDLR DQAARCMNCG IPYCHGTGSA
QPGATGCPVN NQIPDWNDLV YNGYWQEAAR TLHSTNNFPE FTGRICPAPC EASCTLNIDD
NPVTIKTIEC AIVDTAFDNG WVTPEIAAVK TGQSVAVVGA GPAGLACAQQ LARAGHDVHV
YEKFAKAGGL LRYGIPDFKM EKHLIDRRVA QMEAEGVTFH YGAPVGGSTP GAVDPAELLK
QYDAVALTGG AEAPRDLPIP GRELGGIHFA MDFLTQQNRR VSGEAVNGTD ILAAGKNVVV
IGGGDTGSDC IGTSIRQGAK SVTQIEIMPA PPERENKALT WPNWPMKMRT SSSQAEGAAR
EFAVMTQSFE GEGGVVKKLN CVRVDAKFQP IPGTEFVLEA DLVLLAMGFV SPVKEGLLTQ
LGVALDPRGN VAADLAHFTT SVDKVFAAGD MRRGQSLVVW AIREGRLCAQ AIDRFLMGAT
TLPR
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