Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0944 |
Symbol | |
ID | 6408598 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 1004180 |
End bp | 1005175 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642710858 |
Product | band 7 protein |
Protein accession | YP_001989977 |
Protein GI | 192289372 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.188485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTTTTATG ATCTCAGCGG GTTCGATGTG GTGTCCATCG TTCTCGTCCT GCTGGTGATC CTGACGCTGT TCGCCGGCGT CAAGACGGTG CCGCAGGGGT ACAACTGGAC CATCGAGCGG TTCGGCAAGT TCACCCGGAC GCTGTCGCCG GGCCTCAACC TGATCATTCC GTATTTCGAT CGCGTCGGTC GCAAGATGAA CGTGATGGAG CAGGTGATCG AGATCCCGCA GCAGGAAGTC ATCACCAAGG ACAACGCCAC CGTCACAGTC GACGGCGTCG CGTTCTACCA AGTGTTCGAC GCCGCCAAGG CGAGCTACGA GGTCGATAAT CTGCAGCAGG CGATCATCGT GCTGACCATG ACCAACATCC GTTCGGTGAT GGGCTCGATG GATCTCGACC AGGTGCTGTC GCATCGCGAC GAGATCAACG AGCGACTGCT GCGCGTCGTC GACGCTGCGG TGTCGCCATG GGGCATCAAG GTCAACCGCA TCGAGATCAA GGACATTGTG CCGCCGAACG ATCTGGTGGA GGCGATGGGC CGGCAGATGA AGGCCGAGCG CGTCAAGCGC GCCGACATCC TGCAGGCCGA AGGCCAGCGT CAGTCGGAGA TCCTGCGCGC CGAGGGCGCC AAGCAGGCTC AGATCCTGCA GGCCGAGGGC CGTCGCGAAG CCGCGTTCCG CGACGCAGAG GCGCGCGAGC GCTCCGCCGA AGCCGAAGCA CGCGCGACCC AGATGGTGTC GGAAGCGATC GGCAAGGGCG ATGTCGCGGC GCTCAACTAC TTCATCGCCG ATAAATACAT CAAGGCATTC GGCCAACTCG CCGAATCGCC GAACCAGAAG GTGATCATGC TGCCGGTCGA AGCGATGAGT ATGCTCGGTT CGCTCGCCGG CATCGGCGAG ATCGCCAAGG CGACCTTCGG CGAAGGCGCC GCCTCCGCGC AGGCCGCCCG CCGCGGCTCG GTGCCGCCGA CGACGCCGGT GCCGCCGGCG CGGTGA
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Protein sequence | MFYDLSGFDV VSIVLVLLVI LTLFAGVKTV PQGYNWTIER FGKFTRTLSP GLNLIIPYFD RVGRKMNVME QVIEIPQQEV ITKDNATVTV DGVAFYQVFD AAKASYEVDN LQQAIIVLTM TNIRSVMGSM DLDQVLSHRD EINERLLRVV DAAVSPWGIK VNRIEIKDIV PPNDLVEAMG RQMKAERVKR ADILQAEGQR QSEILRAEGA KQAQILQAEG RREAAFRDAE ARERSAEAEA RATQMVSEAI GKGDVAALNY FIADKYIKAF GQLAESPNQK VIMLPVEAMS MLGSLAGIGE IAKATFGEGA ASAQAARRGS VPPTTPVPPA R
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