| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0940 |
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| Symbol | |
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| ID | 6408594 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 998752 |
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| End bp | 1000842 |
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| Gene Length | 2091 bp |
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| Protein Length | 696 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710854 |
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| Product | Peptidyl-dipeptidase Dcp |
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| Protein accession | YP_001989973 |
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| Protein GI | 192289368 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0339] Zn-dependent oligopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.131573 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCAGAAA GCTCCGGACC GATTGCCGCA CCCGCTGATG CCGGCAATCC GCTGCTGGCC
GCCTGGACCA CCCCGTTCGA GACACCGCCG TTCGCCGAGA TCAGGCCCGA GCACTTCATG
CCGGCCTTCG AGCAGGCGTT CGCCGACCAC GCGGGCGAGA TCGCCGCGAT CGTCAACGAT
CCGACCGAGC CGGACTTCGA CAACACCGTC ACGGCGCTGG AGCGCTCAGG CAAGCTGCTG
AACCGGGTCG CCGCGGTGTT CTACGATCTG GTGTCGGCGC ATTCGAGCCC GGAGCTGCTG
AAGATCGACG AAGAGGTGTC GCTGCGGATG GCGCGGCACT GGAATCCGAT CATGATGAAC
GCGGTGCTGT TCGGCCGGAT CGCGGCGCTG CGCGACAAGG CGGCGCGGCT GAACCTGACG
CCGGAGCAGA GCCGGCTGCT GGCACGCAGC TACACCCGCT TCCACCGTGC CGGCGCCGGC
CTCGATGAGG CGTCCAAGGC GCGCATGGCG GCGATCAACG AACGCCTGGC GCAGCTCGGC
ACCAGCTTCA GCCATCATCT GCTCGGCGAC GAGCAGGAAT GGATGATGGA GCTCGGCGAG
GGCGATACCG AGGGGCTGCC CGACAGCTTC GTGGCGGCGG CGCGCGCTGC GGCGGAAGAG
CGCGAGCTGC CCGGCAAGGC CGTGGTGACG CTGTCGCGGT CGTCGGTCGA GCCGTTCCTG
AAGATGTCGA GCCGGCGCGA TCTGCGCGAG AAGGTGTACC GCGCCTTCAT CGCCCGCGGC
GACAACGGTA ACGATAACAA CAACAACGCG ATCATCGGCG AGATCCTGAG CCTGCGCGAA
GAAAGCGCCA AGCTGCTCGG CTATCCGACC TTTGCGGCCT ACCGTCTGGA AGACTCGATG
GCCAAGACGC CGGAGGCGGT GCGCGGCCTT TTGGAGCGGG TGTGGAAGCC GGCGCGCGCT
CGCGCGCTCG CCGACCGCGA CGCGCTGCAG GAGCTGGTCA CGGAAGAGGG CAGCAACTTC
AAGCTGGCGC CGTGGGACTG GCGCTACTAC GCCGAGAAGC TGCGCCAGCG CCGCGCCAAT
TTCGACGATG CGGCGATCAA GCCGTATCTG ACGCTCGACG GCATGATCGC CGCGGCGTTC
GACACCGCCA CGCGGCTGTT CGGCATCACC TTCCAGGAAC GCAAAGACGT GCCGGTGTGG
CACCCCGACG TTCGCGTTTG GGAAGTGAAG GACGCCGACG GCGCTCATCG CGGGCTGTTC
TACGGCGACT ACTATGCCCG GCCCTCGAAG CGTTCCGGCG CCTGGATGAC CTCGCTGCGC
GATCAGCAGA AGCTCGACAG CGCGGTGGCG CCGCTGATCA TCAACGTCTG CAACTTCGCC
AAGGGCGCCG GCGGCGAGCC GTCGCTGCTG TCGCCCGACG ACGCCCGCAC GCTGTTCCAC
GAATTCGGCC ACGGCCTGCA CGGCATGCTG TCGGACGTGA CCTACCCGTC GCTGTCCGGC
ACCAGCGTGT TCACCGACTT CGTCGAGCTG CCGTCGCAGC TTTACGAGCA TTGGCAGGAG
CAGCCGCAAG TGCTCCGGCA GTTCGCCCGT CACTATCAGA CCGGCGAGCC GCTGCCCGAC
GACCTGTTGC AGCGGTTCAT CGCCGCCCGC AAGTTCGGCC AGGGCTTCGC CACCGTCGAG
TTCGTCTCCT CGGCGCTGCT CGATCTCGAA TTCCACACCC AGCCCGCCGC CAGCATCGGC
GAGGTCCGCG CCTTCGAGCG CAAGGAACTC GACAAGATCG GCATGCCGGA AGAGATCGCG
CTGCGGCACC GGCCGACCCA GTTCGGCCAC ATCTTCTCCG GCGATCACTA CGCTTCGGGC
TACTACAGCT ACATGTGGAG CGAGGTAATG GACGCCGACG CGTTCGGCGC GTTCGAAGAG
GCCGGCGACA TCTTCGCGCC GGACGTGGCC AAGCGGCTGC GCGACGACAT CTATTCGTCC
GGCGGCTCGC GCGATCCGGA GGAAGCCTAT GTGGCGTTCC GCGGCCGCAA GCCGGAGCCC
GACGCGCTGC TGCGCCGCCG CGGCCTGCTC GACACGCCGG AGGCCGCGTA G
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| Protein sequence | MSESSGPIAA PADAGNPLLA AWTTPFETPP FAEIRPEHFM PAFEQAFADH AGEIAAIVND
PTEPDFDNTV TALERSGKLL NRVAAVFYDL VSAHSSPELL KIDEEVSLRM ARHWNPIMMN
AVLFGRIAAL RDKAARLNLT PEQSRLLARS YTRFHRAGAG LDEASKARMA AINERLAQLG
TSFSHHLLGD EQEWMMELGE GDTEGLPDSF VAAARAAAEE RELPGKAVVT LSRSSVEPFL
KMSSRRDLRE KVYRAFIARG DNGNDNNNNA IIGEILSLRE ESAKLLGYPT FAAYRLEDSM
AKTPEAVRGL LERVWKPARA RALADRDALQ ELVTEEGSNF KLAPWDWRYY AEKLRQRRAN
FDDAAIKPYL TLDGMIAAAF DTATRLFGIT FQERKDVPVW HPDVRVWEVK DADGAHRGLF
YGDYYARPSK RSGAWMTSLR DQQKLDSAVA PLIINVCNFA KGAGGEPSLL SPDDARTLFH
EFGHGLHGML SDVTYPSLSG TSVFTDFVEL PSQLYEHWQE QPQVLRQFAR HYQTGEPLPD
DLLQRFIAAR KFGQGFATVE FVSSALLDLE FHTQPAASIG EVRAFERKEL DKIGMPEEIA
LRHRPTQFGH IFSGDHYASG YYSYMWSEVM DADAFGAFEE AGDIFAPDVA KRLRDDIYSS
GGSRDPEEAY VAFRGRKPEP DALLRRRGLL DTPEAA
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