| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0938 |
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| Symbol | |
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| ID | 6408592 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 996477 |
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| End bp | 997619 |
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| Gene Length | 1143 bp |
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| Protein Length | 380 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642710852 |
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| Product | Ornithine decarboxylase |
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| Protein accession | YP_001989971 |
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| Protein GI | 192289366 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGAAC GTATCCGTGA ATTCCTGCGC GACCGCCGCG CCAAGGGTCT GGACGTCGAG
CCGTGCCTGG TCGTTGACCT CGAAGTGGTC CGCGACAACT TCATGCATTT CGCCAAGGCG
CTGCCGGACA GCCGCGTGTT CTATGCGATC AAGGCCAACC CGGCGCCGGA AGTGCTGTCG
CTGCTGGCCT CGCTCGGCTC GTGCTTCGAC TGCGCCTCGG TGCAGGAAAT CCAGATGGCG
CTGGCCGCGG GAGCGACCCC GGACCGCATC TCGTTTGGTA ACACCATCAA GAAGGAGCGC
GACATCGCGC GCGCCTACGA GCTCGGCATC CGCCTGTTCT CGGTCGACTG CACTCCCGAG
GTGGAGAAGG TCGCGCGTGC GGCTCCCGGC TCCAAGGTGT TCTGCCGCAT CCTGTACGAT
TGCGCCGGCG CCGAGTGGCC GCTGTCGCGC AAGTTCGGCT GCGATCCGGA GATGGCGGTG
GACGTGCTCG ACAACGCCAA GCGTCTCGGC CTGGAAGCCT ATGGCATTTC GTTCCATGTC
GGCTCGCAGC AGCGCAAGGT GAAGGCGTGG GACCGTGCGC TGGCGATGGC CGCGCAGGTG
TTCCGCGACT GCGCCGAACG CGGCATCTCG CTGTCGATGG TCAACATGGG TGGCGGCTTC
CCGACCAAGT ATCTGAAGGA AGTCCCGCCG GTGGTGCAGT ACGGCCGCTC GATCTTCCGG
GCGCTGCGCA AGCACTTCGG CAACCAGATC CCGGAGACCA TCATCGAGCC GGGCCGCGGC
ATGGTCGGAA ACGCCGGCGT GATCGAGACC GAAGTCGTTC TGATCTCGAA GAAGAGCGAC
GAGGACGACG TGCGCTGGGT CTATCTCGAC ATCGGCAAGT TCGGCGGTCT CGCCGAGACG
ATGGACGAGT CGATCCGCTA CGCGATCAAG TCGCGTCATG ACGGCGCCGA GATGACGCCC
TGCGTGCTCG CCGGCCCGAC CTGCGATTCG GCCGACGTGC TGTACGAGAA GATGCCGTAT
CCGCTGCCGG TGACGCTCGA GATTGGCGAC AAGCTGCTGA TCGAAGGCAC CGGCGCCTAT
ACGTCGACTT ACTCGTCCGT GGCGTTCAAC GGCTTCCCGC CGCTGGCGAC CTACCACATC
TGA
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| Protein sequence | MTERIREFLR DRRAKGLDVE PCLVVDLEVV RDNFMHFAKA LPDSRVFYAI KANPAPEVLS
LLASLGSCFD CASVQEIQMA LAAGATPDRI SFGNTIKKER DIARAYELGI RLFSVDCTPE
VEKVARAAPG SKVFCRILYD CAGAEWPLSR KFGCDPEMAV DVLDNAKRLG LEAYGISFHV
GSQQRKVKAW DRALAMAAQV FRDCAERGIS LSMVNMGGGF PTKYLKEVPP VVQYGRSIFR
ALRKHFGNQI PETIIEPGRG MVGNAGVIET EVVLISKKSD EDDVRWVYLD IGKFGGLAET
MDESIRYAIK SRHDGAEMTP CVLAGPTCDS ADVLYEKMPY PLPVTLEIGD KLLIEGTGAY
TSTYSSVAFN GFPPLATYHI
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