Gene Rpal_0931 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0931 
Symbol 
ID6408585 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp991404 
End bp992126 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content67% 
IMG OID642710845 
ProductMgtC/SapB transporter 
Protein accessionYP_001989964 
Protein GI192289359 
COG category[S] Function unknown 
COG ID[COG1285] Uncharacterized membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGGTTTC TCACCACCTT CCAGACGGCG GACTTCTTCG ACACGCTGGT CAGCCTCGCC 
GTCGCCTTCG TGCTCGGCAT GCTGATCGGG GCCGAGCGGC AGTATCGGAC CCGCACCGCG
GGGTTGCGCA CCAATGTGCT GGTGGCAGTC GGCGCCGCCG CCTTCGTCGA CCTGGCGATG
CATCTGGCCG GTGCCGACGG CGCGGTCCGG GTGATCGCCT ATGTGGTCTC CGGCATCGGC
TTCCTTGGCG CCGGCGTGAT CATGAAAGAG GGCATGAACG TCCGCGGTCT CAACACCGCG
GCGACGCTGT GGAGCTCGGC GGCAGTTGGC TGCTGCGCCG GCGGCGACTT GGTGGCGCAG
GCAGTGGCGC TCACGGTGTT CGTGATCGCC GGCAATACGC TGCTGCGGCC GCTCGTCAAC
GCCATCAACC GCATCCCGTT CGACGAGCGC ACTTCGGAGG CGACCTATTC GGTTCGCCTC
ACCGCCGACG GCGGTGCCGC CGACCGGCTG CGCGAGCATA TCGAGAAGCG GCTGGAGCAG
GCCGACTATC CGGTTGCCGA GGTCGAGGTC GAGTCCGTCG AACATGCCGA CGACAAGGTA
GAGATCGTCG CCACCCTGGT GTCGACCGCG GTCGAGCCGA ACGAACTCGA CGCGGTGGTC
GCCGAGCTCG GCAAGGAAGC CGGTGTCGAT CACGCCACCT GGGAAACCAG CACTAAAGAT
TGA
 
Protein sequence
MRFLTTFQTA DFFDTLVSLA VAFVLGMLIG AERQYRTRTA GLRTNVLVAV GAAAFVDLAM 
HLAGADGAVR VIAYVVSGIG FLGAGVIMKE GMNVRGLNTA ATLWSSAAVG CCAGGDLVAQ
AVALTVFVIA GNTLLRPLVN AINRIPFDER TSEATYSVRL TADGGAADRL REHIEKRLEQ
ADYPVAEVEV ESVEHADDKV EIVATLVSTA VEPNELDAVV AELGKEAGVD HATWETSTKD