| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0919 |
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| Symbol | |
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| ID | 6408573 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 973736 |
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| End bp | 975400 |
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| Gene Length | 1665 bp |
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| Protein Length | 554 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710833 |
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| Product | General substrate transporter |
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| Protein accession | YP_001989952 |
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| Protein GI | 192289347 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.15683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCTACAC TTGCCGCGAC GAGCAGGCGA TCGGGTGGAA TGACCCGCGA CGAGCGCTTC
GTCATTCTTG CATCTTCGCT CGGTACCGTT TTCGAATGGT ACGACTTCTA TCTGTACGGT
TCGCTCGCCG CGATTATCGG CGCCCAGTTC TTCAGCGCTT ATCCGCCGGC CACCCGGGAC
ATTTTCGCGC TGCTCGCCTT CGCCGCCGGC TTCCTGGTGC GCCCGTTCGG CGCCATCGTG
TTCGGCCGGG TCGGCGACAT CGTCGGCCGT AAATACACCT TCCTGGTCAC CATCCTGATC
ATGGGCCTGT CGACCTTTAT CGTCGGCCTG CTGCCCAATG CGGCCACCAT CGGCATTGCC
GCCCCGATCA TCCTGATCAC GCTGCGCCTG CTGCAGGGCC TCGCGCTCGG CGGCGAATAC
GGTGGCGCCG CGACCTACGT GGCCGAGCAT GCTCCGCCCG GCAAGCGCGG CTACTACACC
GCATTCATTC AGACCACCGC GACCCTCGGC CTGTTCCTGT CGCTGCTGGT GATCCTTGCC
ACCCGCACCA TCGTGGGCGA AGTGGCGTTC GCCGATTGGG GCTGGCGCGT GCCGTTCCTG
GTGTCGGTCG CCTTGCTCGG CGTCTCGGTC TGGATCCGGC TGCGGCTCAA CGAGTCGCCG
GTGTTCAAGA AGATGAAGGA GGAAGGCAAG AGCTCGAAGG CGCCGCTGAC CGAAGCTTTC
GCCAACTGGG GCAACGCGAA GATCGTGCTG ATCGCGCTGC TCGGTGCGGT GATGGGCCAG
GGCGTTGTCT GGTACACTGG CCAGTTCTAC GCGCTGTTCT TCCTGCAATC GATCCTGAAG
GTCGACGGCT ACACCTCGAA CCTGCTGATC GCGTGGTCGC TGCTGCTCGG CACCGGCTTC
TTCATCATCT TCGGCTGGCT GTCGGACAAG ATCGGCCGCA AGCCGATCAT CCTCACCGGC
TGTCTGATCG CGGCACTGTC GTTCTTCCCG ATCTTCCGGA TGATCACGAC ATACGCCAAC
CCGGCGCTGG AAAAGGCGAT CGAGACCGTG AAGGTGCAAG TCGTCGCCGA TCCGGCGGGC
TGCGGCGACC TGTTCAACCC GGTCGGCACA CGCGTCTTCA CCAAGCCGTG CGACACCGCG
CGCGACTTCC TGTCGAAGTC CTCGGTGAAG TACTCCACCG TCAACGGCCC CGCCGGCTCC
GGCGTCAAGG TGATGGTGAA CGAGAAGGAA GTGCCGTACA CCGACGCCAA GACCTCCAAC
CCGCAGGTGC TGGCGGCGGT GCAGGAAGCT GGTTACCCGA AGGCCGGCAA CCCGCAGATC
ATCAAGATGG CGCACCCGTT CGACGTGTTC AATTCGAGCA CCGCAGCGGT GATCGGACTG
TTGTTCGTCC TGGTGCTGTT CGTCACGATG GTCTACGGCC CGATCGCGGC GCTGCTGGTC
GAACTGTTCC CGACTCGGAT TCGCTATACC TCGATGTCGC TGCCGTATCA CATCGGCAAC
GGCTGGTTCG GCGGCCTGCT GCCGGCGACT GCGTTCGCGA TCGTCGCCTC GACCGGCGAT
ATCTATGCCG GCCTGTGGTA CCCGATCGTC TTCGCGTCGA TCACTGTGGT GATTGGCCTG
ATCTTCCTGC CGGAAACCAA GAACGTCGAC ATCAGCAAGA CCTGA
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| Protein sequence | MATLAATSRR SGGMTRDERF VILASSLGTV FEWYDFYLYG SLAAIIGAQF FSAYPPATRD
IFALLAFAAG FLVRPFGAIV FGRVGDIVGR KYTFLVTILI MGLSTFIVGL LPNAATIGIA
APIILITLRL LQGLALGGEY GGAATYVAEH APPGKRGYYT AFIQTTATLG LFLSLLVILA
TRTIVGEVAF ADWGWRVPFL VSVALLGVSV WIRLRLNESP VFKKMKEEGK SSKAPLTEAF
ANWGNAKIVL IALLGAVMGQ GVVWYTGQFY ALFFLQSILK VDGYTSNLLI AWSLLLGTGF
FIIFGWLSDK IGRKPIILTG CLIAALSFFP IFRMITTYAN PALEKAIETV KVQVVADPAG
CGDLFNPVGT RVFTKPCDTA RDFLSKSSVK YSTVNGPAGS GVKVMVNEKE VPYTDAKTSN
PQVLAAVQEA GYPKAGNPQI IKMAHPFDVF NSSTAAVIGL LFVLVLFVTM VYGPIAALLV
ELFPTRIRYT SMSLPYHIGN GWFGGLLPAT AFAIVASTGD IYAGLWYPIV FASITVVIGL
IFLPETKNVD ISKT
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