| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0908 |
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| Symbol | |
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| ID | 6408562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 966075 |
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| End bp | 967364 |
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| Gene Length | 1290 bp |
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| Protein Length | 429 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710822 |
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| Product | peptidase M16 domain protein |
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| Protein accession | YP_001989941 |
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| Protein GI | 192289336 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0612] Predicted Zn-dependent peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGTCG AAGTCAGCAA GCTTCCCTCC GGCCTCACCA TCGTCACCGA CACCATGCCG
CATCTCGAGA CTGCAGCGCT CGGCGTCTGG ACCGGCGTCG GCGGCCGCGA CGAAAAGCCG
GACGAGCACG GCATCTCGCA TCTCCTCGAA CACATGGCGT TCAAGGGCAC CACGCGCCGC
ACCTCGCGCG AGATCGCCGA GGAGATCGAG GCGGTCGGCG GCGACCTCAA TGCCGGCACT
TCGACCGAGA CCACCGCGTA TTACGCGCGG GTGATGAAGG CAGACGTGCC GCTGGCGCTC
GATGTCTTGT CCGACATTCT CGCCAATCCG TCATTCGAAG CCGAAGAGCT CGAACGCGAG
AAGAGCGTGA TCGTGCAGGA GATCGGCGCC GCGCAGGACA CGCCCGACGA CGTCGTGTTC
GAATACCTGA ACGAGCTATG CTACCCGGAG CAGCCGATCG GCCGTTCGTT GCTCGGCACC
GCCAAGACGC TGAAGAGCTT CAGCCGGGAA AAGCTGCAGT CGTATCTGTC GACGCATTAT
CGCGGTCCCG ACATGGTGGT GGCGGCGGCC GGCGCGGTCG ATCACGCCCG CATCGTCGAA
GAGGTTTCCC ACCGCTTCGC CAGCTTCGAC GGCACGCCGG CACCGAAGCC GCAGCCGGCG
ATGTTCGGCG CGGGCGGCTC CCGCGTCGTG CACCGCGACC TCGAGCAGGC GCATCTGACC
CTGGCGCTCG AAGGGCTGCC GCAGAGCGCG CCGACGCTGT TCAGCCTGCA GGTGTTCACC
AACATCCTCG GCGGCGGAAT GTCGTCGCGG CTGTTCCAGG AGGTGCGGGA GAAGCGCGGG
CTGTGCTACT CGATCTACAC CTTCCATGCG CCCTACAGCG ACACCGGGTT CTTCGGTCTC
TATACCGGCA CCGATCCGGC CGATGCGCCG GAGATGATGG AAGTGATCGT CGATGTCATC
AACGATGCGG TCGACACCCT GACCGACGCC GAGATCTCTC GGGCCAAGGC CCAGATGAAG
GCAGGCCTGC TGATGGCGCT GGAAAGCTGT TCGTCGCGTG CCGAGCAGCT CGCGCGGCAC
ATCCTGGCCT ACGGCCGGCC GTTGCCGGTC GACGAGCTGG TCGGACGAAT CGATGCCGTC
ACCATCGATA CCGCGCGGGA AGCAGGGCGC ACGCTGCTGG CGCGCAGCCG GCCGGCCGTG
GTGGCGCTCG GCAGCGGCCG CGGTCTCGAC AGAGCTGTCA GCTTTGCTGA AGGCTTGACA
CAATCCAAGG CCAAGACGTC CTATCATTGA
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| Protein sequence | MTVEVSKLPS GLTIVTDTMP HLETAALGVW TGVGGRDEKP DEHGISHLLE HMAFKGTTRR
TSREIAEEIE AVGGDLNAGT STETTAYYAR VMKADVPLAL DVLSDILANP SFEAEELERE
KSVIVQEIGA AQDTPDDVVF EYLNELCYPE QPIGRSLLGT AKTLKSFSRE KLQSYLSTHY
RGPDMVVAAA GAVDHARIVE EVSHRFASFD GTPAPKPQPA MFGAGGSRVV HRDLEQAHLT
LALEGLPQSA PTLFSLQVFT NILGGGMSSR LFQEVREKRG LCYSIYTFHA PYSDTGFFGL
YTGTDPADAP EMMEVIVDVI NDAVDTLTDA EISRAKAQMK AGLLMALESC SSRAEQLARH
ILAYGRPLPV DELVGRIDAV TIDTAREAGR TLLARSRPAV VALGSGRGLD RAVSFAEGLT
QSKAKTSYH
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