Gene Rpal_0898 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0898 
Symbol 
ID6408552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp956891 
End bp957439 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content67% 
IMG OID642710812 
ProductInvasion associated locus B family protein 
Protein accessionYP_001989931 
Protein GI192289326 
COG category[R] General function prediction only 
COG ID[COG5342] Invasion protein B, involved in pathogenesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCTTCG CCAGACTTTC GCCAATCCTT GCCTCGAGCC GCCGCGCTGC GTCCGGGGCC 
ATGCTGGCGG TCGGGTTGAT CGCGCTGGCG GCGCTGGCCG GCAGCAGCAC GGCCCAGGCC
CAGGGCGCGG TGAAGTCCGT GCATGGTGAC TGGCAGATCC GCTGCGACAC CCCGCCGGGC
GCCAAGGCCG AGCAATGCGC ACTGATTCAG AGCGTGGTCG CGGAGGATCG CTCCAACGCC
GGCCTCACCG TCATCATCCT CAAGACCGCC GATCAGAAGA GCAAGCTGAT GCGCGTGGTG
GCGCCGCTCG GCGTGCTGCT GCCGTCGGGT CTCGGCCTTA AGCTCGACAA CGCCGATATC
GGCCGCGCCG GCTTCGTGCG CTGCCTGCCG AACGGCTGCG TCGCCGAAGT GGTGATGGAC
GACAAGCTGC TCGGCCAGCT GCGCAACGCC AAGACCGCGA CCTTCATCAT CTTTGAAACA
CCGGAAGAAG GCATCGGCTT CCCGCTGAGC CTCAACGGCC TCGGCGAAGG CTACGACAAG
CTCCCGTAG
 
Protein sequence
MGFARLSPIL ASSRRAASGA MLAVGLIALA ALAGSSTAQA QGAVKSVHGD WQIRCDTPPG 
AKAEQCALIQ SVVAEDRSNA GLTVIILKTA DQKSKLMRVV APLGVLLPSG LGLKLDNADI
GRAGFVRCLP NGCVAEVVMD DKLLGQLRNA KTATFIIFET PEEGIGFPLS LNGLGEGYDK
LP