Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0898 |
Symbol | |
ID | 6408552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | - |
Start bp | 956891 |
End bp | 957439 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 642710812 |
Product | Invasion associated locus B family protein |
Protein accession | YP_001989931 |
Protein GI | 192289326 |
COG category | [R] General function prediction only |
COG ID | [COG5342] Invasion protein B, involved in pathogenesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGCTTCG CCAGACTTTC GCCAATCCTT GCCTCGAGCC GCCGCGCTGC GTCCGGGGCC ATGCTGGCGG TCGGGTTGAT CGCGCTGGCG GCGCTGGCCG GCAGCAGCAC GGCCCAGGCC CAGGGCGCGG TGAAGTCCGT GCATGGTGAC TGGCAGATCC GCTGCGACAC CCCGCCGGGC GCCAAGGCCG AGCAATGCGC ACTGATTCAG AGCGTGGTCG CGGAGGATCG CTCCAACGCC GGCCTCACCG TCATCATCCT CAAGACCGCC GATCAGAAGA GCAAGCTGAT GCGCGTGGTG GCGCCGCTCG GCGTGCTGCT GCCGTCGGGT CTCGGCCTTA AGCTCGACAA CGCCGATATC GGCCGCGCCG GCTTCGTGCG CTGCCTGCCG AACGGCTGCG TCGCCGAAGT GGTGATGGAC GACAAGCTGC TCGGCCAGCT GCGCAACGCC AAGACCGCGA CCTTCATCAT CTTTGAAACA CCGGAAGAAG GCATCGGCTT CCCGCTGAGC CTCAACGGCC TCGGCGAAGG CTACGACAAG CTCCCGTAG
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Protein sequence | MGFARLSPIL ASSRRAASGA MLAVGLIALA ALAGSSTAQA QGAVKSVHGD WQIRCDTPPG AKAEQCALIQ SVVAEDRSNA GLTVIILKTA DQKSKLMRVV APLGVLLPSG LGLKLDNADI GRAGFVRCLP NGCVAEVVMD DKLLGQLRNA KTATFIIFET PEEGIGFPLS LNGLGEGYDK LP
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