Gene Rpal_0889 details

Gene Information

• Locus tag: Rpal_0889
• ID: 6408543
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 950013
• End bp: 950504
• Gene Length: 492 bp
• Protein Length: 163 aa
• Translation table: 11
• GC content: 66%
• IMG OID: 642710803
• Product: transcriptional regulator, MarR family
• Protein accession: YP_001989922
• Protein GI: 192289317
• COG category: [K] Transcription
• COG ID: [COG1846] Transcriptional regulators

Plasmid Coverage information

• Num covering plasmid clones: 31
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAACGCA AACCGTCGAC CGAGGCCACT GCGGCCTGGG TCCGCCTGAT GCGGGTCCGG 
AGCCGGGTGT TGGACGCTGT CGAGCAGGAT CTGAAGAAGG CGGGCTTTCC GCCGCTGGCA 
TGGTACGACG CGCTGCTCGA ATTGTCGCGC GCGCCGGGCG GCGAGATGCG CCCGGTCGAG 
CTCGAAAAGC AGATGCTGAT CCCGCAATAC TCCACCTCGC GCCTGGTCGA CCGGCTTGTC 
GACGAGGGGT TGGTGGTGCG CCGCGAATGC CGCAGCGACA AGCGCGGCCA GTTCGTCGAA 
ATCACCGAGG CTGGACGCGA ATTGCAAAAG AAAATGTGGG CCGCCTATTC GGCGACGATC 
GAAAAACATG TCGGCTCGAA ATTGTCCGAT GCCGACGCCG TCCGGCTGTG CGGCCTGCTC 
GACCGGCTCG GCTGCTCCTG CGACGGCTCC GCCGCTGCGC TCGACGCGCG AGACACCGCA 
GTCTCGCGAT GA 

 

Protein sequence

MKRKPSTEAT AAWVRLMRVR SRVLDAVEQD LKKAGFPPLA WYDALLELSR APGGEMRPVE 
LEKQMLIPQY STSRLVDRLV DEGLVVRREC RSDKRGQFVE ITEAGRELQK KMWAAYSATI 
EKHVGSKLSD ADAVRLCGLL DRLGCSCDGS AAALDARDTA VSR