Gene Rpal_0883 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0883 
Symbol 
ID6408537 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp941945 
End bp942502 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content67% 
IMG OID642710797 
Producttranscriptional regulator, TetR family 
Protein accessionYP_001989916 
Protein GI192289311 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.476269 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGG ATACCAAAGA TCGGCTGACG CGGGCGGACT GGCTCGCCCA TGGGCTGCGG 
ACACTCGCCC GGCACGGCAC CAACGCCCTC AAGGTCGGAG ATTTGGCCGC CGGCCTGGAC 
GTGTCGCGCG GCAGCTTCTA CTGGCACTTC AAGGACGCGA CCGACTTCCG CACCCAGCTG 
CTGCAGCTCT GGAAGGAGCG GGTCACCGAA CAGGTCTTCC GCGACATCGA TGCGGCGATC 
GTCGGCCCGG CGCGGCTGAC GCATCTGATG AAGCTCGCCT TCAACGAGGA CCGCAGCCTG 
GACCGCGCGA TCCGCGAGCT CGCCGCGACT GATCCGGCCG CCGCCGAGAT GGTCGCCGCG 
GTCGACGCGC GGCGGGTCGA GTATCTATCC AAGCTGATGA TCGAATCCGG CGTCGAGAGC 
CGCCATGCCC GGCCGCGTGC GGAGTTCCTG TACTGGGCCT ATATAGGCCA GACCGCGGTG 
ATGAATCCGG CGCTCAACGC CGTGACGGAA TCCGACATCG ACGACCTCAG CGCGCTGTTC 
ACCCGCGCGG GCGGTTAG
 
Protein sequence
MDTDTKDRLT RADWLAHGLR TLARHGTNAL KVGDLAAGLD VSRGSFYWHF KDATDFRTQL 
LQLWKERVTE QVFRDIDAAI VGPARLTHLM KLAFNEDRSL DRAIRELAAT DPAAAEMVAA 
VDARRVEYLS KLMIESGVES RHARPRAEFL YWAYIGQTAV MNPALNAVTE SDIDDLSALF 
TRAGG