Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0876 |
Symbol | |
ID | 6408530 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 932017 |
End bp | 932739 |
Gene Length | 723 bp |
Protein Length | 240 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 642710790 |
Product | metallophosphoesterase |
Protein accession | YP_001989909 |
Protein GI | 192289304 |
COG category | [R] General function prediction only |
COG ID | [COG1407] Predicted ICC-like phosphoesterases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.432456 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGAAGCC AAACCGCTTG GACCTCCACC CCCGACCCCT CCCCGCAAGG GGGAGGGGAG CAGAGCGTCA CCATCGCCGG TGCCGCGTTC GTCGCTGATC TGTCGGGCGC GCTGTACTGG GAAGACGAGC GGCTGCTGGT CGTCTCCGAT CTGCATCTGG AAAAAGGGTC GAGCTTCGCG ATGCGCGGCG TGCTGCTGCC GCCTTATGAC ACGGTGGCGA CGCTCGGACG GCTCGGCGCG GTGATCGCCC GGTTCAATCC TGCAACCGTG ATCGCGCTCG GCGACAGCTT TCACGACCGC GACGCCCATG GCCGGCTGTC GCCCGCCAAT CGTGACATCC TCACCGCGCT ACAGGCGCGG CGCGACTGGA TCTGGATCGC CGGCAATCAC GATCCCGATC TGCCCTGCGA TTTCGGCGGC AGCGTTGCGG CTGAGGTGGC GGTCGGTGCC GTCGCGTTCC GCCACGAGCC GACCGGCGCC TGCGGTGAGA TCGCCGGCCA CCTGCATCCG AAGGCGAGGG TCAGCCGCCG CGGCCGCAGC ATCGAACGGC GCTGCTTTGC CGGCGACGGC ACGCGCGTGG TGATGCCGGC GTTCGGCGCT TATACGGGCG GGCTGAACAT TCGCGACGAG GCGTTCGCGC GACTGTTCGG CGGCGCGGCT TTCATTGCCC ACGTGCTCGG CGACAACCGC CTCCACGCCA TCGCCGCCTC ACGGTGTTGC TGA
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Protein sequence | MRSQTAWTST PDPSPQGGGE QSVTIAGAAF VADLSGALYW EDERLLVVSD LHLEKGSSFA MRGVLLPPYD TVATLGRLGA VIARFNPATV IALGDSFHDR DAHGRLSPAN RDILTALQAR RDWIWIAGNH DPDLPCDFGG SVAAEVAVGA VAFRHEPTGA CGEIAGHLHP KARVSRRGRS IERRCFAGDG TRVVMPAFGA YTGGLNIRDE AFARLFGGAA FIAHVLGDNR LHAIAASRCC
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