| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0875 |
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| Symbol | |
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| ID | 6408529 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 929226 |
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| End bp | 931952 |
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| Gene Length | 2727 bp |
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| Protein Length | 908 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710789 |
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| Product | DEAD/H associated domain protein |
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| Protein accession | YP_001989908 |
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| Protein GI | 192289303 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1201] Lhr-like helicases |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.888716 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGCCTCG CCGATTCCTC TCTTGATCTG CTGCCCGACC GGTTCCGCCG CTGGTTCGCC
GAGCGCGGCT GGGCGCCGCG CGATCATCAG CTCGCGCTGC TGGAAAAGGC ACGGGTGCAA
CGCTCCGCGC TGCTGATCGC GCCGACCGGC GCCGGCAAGA CCCTGGCTGG TTTCCTCCCA
TCGCTGGTGG AACTGAGCGG GGCGGCACCT AACCTCTCCC CGTTCGCGGG GAGAGGTCGA
CTTGCTGGCG TAGCCGGCGA GTCGGGGGAG GGGGGGGATG AATCTCCACC TGCGGAAGTG
GCGCTCACGA CCGCGACGCC TCCTCATCCG GCGCAGCAAG CTGCGCTTGC CGCGCCACCT
TCTCCCCGCG CGCGGGGAGA CGGAATGGTC TCGCGGAGCG GCGGGCTGCA TACGCTCTAC
ATCTCGCCAC TCAAGGCGCT CGCAGTCGAC ATCGCGCGTA ATCTCGAAAC GCCGATCGCG
GAGATGAAGC TGCCGATCCG CGTCGAAACC CGCACCGGCG ATACGCCGGT GTCGCGGCGG
ACACGGCAGC GCAAATATCC GCCCGACATC CTGCTGACAA CGCCGGAGCA GCTCGCGCTG
CTGCTCGCCT CCGACGATGC GCCCTATCTG TTCGGCACCC TGCGGCGGAT CGTGCTGGAC
GAACTGCACG CGCTGGTGAC GTCGAAGCGC GGCGATCTGC TATCGCTCGG GCTCGCCCGG
CTGTGGCGGA TCGCGCCACA GCTCCGCGCC ATCGGTCTGT CGGCGACGGT CGCCGATCCC
GACGAACTCG CCCGCTTTCT GGTGCCGCAG CCCTTTGTCC CCTCTCCCGC AAGGGGAGAG
GGAGACGAGA GGGCCGTTGA TCAAGCCGAC ATCGTCGTCG CCACCGGCGC CGCGCCGCCG
ATTGTCGAGA TGCTCGACAC CAAGGAACGG CTGCCGTGGG CCGGGCACTC TGCGCGCCAC
GCGCTGCCGG AGATCTACGA TCTGATCCGG CGCAACACCA CGACGCTGGT GTTCGTCAAC
ACCCGCAGCC AGGCCGAGAT GCTGTTCCAG GAGCTTTGGC GCATCAACGA CGACAACCTC
GCGATCGCGC TGCATCACGG CTCGCTCGAT GTCGGTCAGC GCCGCAAGGT CGAGGACGCG
ATGGCGGCGG GACGGCTGCG CGGCGTGGTG TGTACGTCGT CGCTCGATCT CGGCGTCGAC
TGGGGCGACG TCGATCTGGT CGTCAATGTC GGCGCACCTA AAGGCTCGTC GCGGCTGATG
CAGCGCATCG GCCGTGCTAA CCACCGCATC GACGAAGCCT CGCGCGCCGT GCTGGTGCCG
TCCAATCGCT TCGAAGTGCT GGAATGCGTC GCCGCAATCG ATGCTGTCGC CGAGAACGCG
CAGGACACGC CGCCGCAGCG CAAGGGCGCG CTCGACGTGC TGGCGCAGCA CATTCTCGGC
TGCGCCTGCG GCGAACCGTT TGTCGCCGAT GATCTGTACG CGGAAATTCG CAGCGCTGCG
CCCTATGCGG ATCTGTCGCG CGGTGATTTC GACGACACGC TCGATTTCGT CGCCAGCGGC
GGCTACGCGC TGAAGAGCTA CGAGCGCTTC GCCCGCATCA AGCAGGACAA GCAGGGCAAA
TGGCGCGTCG CCAATCCGAA GGTGCGGCAG GCCTATCGCC TGAATGTCGG CACCATCGTC
GAAGAGGCGA TGCTGAAGGT GAAGCTCGTG CGCTCGTCGC GCGCCAAGGG CGGCGGCAGC
ACCGGCGCGA TCGCGCGCGG CGGGCGGATG CTCGGCCAGA TCGAAGAGGG CTTCATCGAA
GGCCTGACAG CCGGCGACAC CTTTGTGTTC GGCGGCGAGG TGGTGCGCTA CGAGGCGCTG
ATGGAGGATC AGGTCTACGT CTCGCGCGCC CACGACAAGG ACGCGCGGGT GCCGTCCTAC
ATGGGTGGCA AGTTTCCGCT CTCGACCTAC CTCGCCGAGC GCGTCCGCGG CCTGCTCGCC
GATAAGCGCA GCTGGACTGG CCTGCCGGAT CAGGTGCGCG ATTGGTTGGC GCTCCAGACC
GAGGCCTCGC AGGTGCCGGG CCGGCGCGAG CTGGTGATCG AGACGTTCCC GCGTGCCGCC
AAGTACTATC TCGTCTGCTA TCCGTTCGAG GGGCGGCTGG CGCATCAGAC GCTCGGCATG
CTGCTGACGC GGCGGCTGGA ACGCGCCCGC GCCCGGCCGC TCGGTTTCGT CGCGAATGAA
TACGCCCTCG CGGTGTGGGG GCTCAGCGAC ATGTCGCAGA TGATCCGGCA GGGCCGGCTC
GATCTCGATG CGCTGTTCGA TCCGGACATG CTGGGCGACG ATCTCGAAGC CTGGCTCGCG
GAATCGGCGC TGATGAAGCG CACCTTCCGC AACTGCGCGA TCATCTCCGG CCTGATCGCA
CGGCGCTTCG CCGGCGAAGA GAAGTCGCGC CGCCAGGTGC TGTTCTCGAC CGACCTCGTC
TACGACGTGC TCAACAAGCA TCAGCCCGAC CATGTGCTGC TGCGCGCCGC CCGTGCCGAC
GCCGCCACCG GGCTGCTCGA TCTGCGGCGA CTGAGTGATA TGCTGATGCG AATCAACGGG
CGCATCGTCC ACAAGGAACT CGACCGGGTG TCGCCGCTCG CGGTGCCGGT GATGCTGGAA
ATCGGCCGGG AAGCCGTGTA CGGCGAGGCC TCCGATGTCC TGCTCGCCGA AGCCGCCGAT
GAACTGGTGC GCGAGGCAAT GAGCTGA
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| Protein sequence | MSLADSSLDL LPDRFRRWFA ERGWAPRDHQ LALLEKARVQ RSALLIAPTG AGKTLAGFLP
SLVELSGAAP NLSPFAGRGR LAGVAGESGE GGDESPPAEV ALTTATPPHP AQQAALAAPP
SPRARGDGMV SRSGGLHTLY ISPLKALAVD IARNLETPIA EMKLPIRVET RTGDTPVSRR
TRQRKYPPDI LLTTPEQLAL LLASDDAPYL FGTLRRIVLD ELHALVTSKR GDLLSLGLAR
LWRIAPQLRA IGLSATVADP DELARFLVPQ PFVPSPARGE GDERAVDQAD IVVATGAAPP
IVEMLDTKER LPWAGHSARH ALPEIYDLIR RNTTTLVFVN TRSQAEMLFQ ELWRINDDNL
AIALHHGSLD VGQRRKVEDA MAAGRLRGVV CTSSLDLGVD WGDVDLVVNV GAPKGSSRLM
QRIGRANHRI DEASRAVLVP SNRFEVLECV AAIDAVAENA QDTPPQRKGA LDVLAQHILG
CACGEPFVAD DLYAEIRSAA PYADLSRGDF DDTLDFVASG GYALKSYERF ARIKQDKQGK
WRVANPKVRQ AYRLNVGTIV EEAMLKVKLV RSSRAKGGGS TGAIARGGRM LGQIEEGFIE
GLTAGDTFVF GGEVVRYEAL MEDQVYVSRA HDKDARVPSY MGGKFPLSTY LAERVRGLLA
DKRSWTGLPD QVRDWLALQT EASQVPGRRE LVIETFPRAA KYYLVCYPFE GRLAHQTLGM
LLTRRLERAR ARPLGFVANE YALAVWGLSD MSQMIRQGRL DLDALFDPDM LGDDLEAWLA
ESALMKRTFR NCAIISGLIA RRFAGEEKSR RQVLFSTDLV YDVLNKHQPD HVLLRAARAD
AATGLLDLRR LSDMLMRING RIVHKELDRV SPLAVPVMLE IGREAVYGEA SDVLLAEAAD
ELVREAMS
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