| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0874 |
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| Symbol | |
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| ID | 6408528 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 927830 |
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| End bp | 929050 |
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| Gene Length | 1221 bp |
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| Protein Length | 406 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710788 |
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| Product | putative amino-acid ABC transport system, periplasmic binding protein |
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| Protein accession | YP_001989907 |
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| Protein GI | 192289302 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.034766 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAATCTGC GCACCAGCTC CGTCCGCACG TCCGTGGCGG CGATCGCGGC GATGATGTTG
ACCGCGGGGG CGGCAATTGC GGCGGACAAG AAATACGATC CGGGCGCCAG CGACACCGAA
ATCAAGATCG GCCAGACCGT CCCGCATTCC GGTCCCGGCT CGCTCTACGG CGTACTCGGC
CGCGTCGGCG AAGCCTATTT CCAGATGCTG AACGAGAAGG GCGGCATCAA CGGCCGCAAG
ATCAAGTTCA TCACCCTGGA CGACTCCTAC AGCGCGCCGA AGGCGGTGGA AGCGACCCGC
CGGCTGGTCG AGCAGGAGGA AGTGCTGGCG CTGTACGGCT CGCTCGGCAC CGCGCCTCAG
ACTGCAGTCC ATAAGTATCT GAATTCCAAG AAGGTTCCGC AGCTTTTGCT GAACACCGGG
GCGTCGAAAT GGAACGACCC GAAGAACTTC AAATGGACCA TGGCGGGGCT GCCGCTGTAC
CCGACCGAAG CCCGCATCCT TGCCAAGCAC GTTGTCGCGG TGAAGCCCGA CGCCAAGGTC
GCGATCCTCT ACCAGAACGA CGATTTCGGC CGTGACTTCC TGGCGCCGTT CAAGAAGGTG
CTGGAAGAGG CCGGCGGCAA GGCCAAGGTG GTGGCGGAAG CCAGCTACGA CCTGACCGAG
CCGACGATCG ACTCGCAGAT CATCAACCTG TCGAAGTCCG GCGCCGACGT GTTCTTCAAC
ATCACCACCG GCAAGGCGAC CTCGCAGTCG ATCCGCAAGA TCGCCGAGAT CGGCTGGAAG
CCGCTGCATT TGCTGTCGGC TGGCTCGACC GGCCGCTCGA TCCTGAACGC CGCCGGGCTC
GACAACGCCA AGGGCATCGT GGCGATCCGC TACTCCAAGG AAGTCGGCGT GCCGCGGTTC
GAGAACGATC CCGACGTCAA GGCGTTCGAG GAGCTGCGCG CCAAGTATCT GCCCAACGTC
GACAAGGACA ACACCATCGC GTACGCGGGC TACGGCCAGG CCGTGACGAT GGCCGAGATC
CTGCGCCGCT GCGGCGATAA CCTGACCCGC GAAAACGTGA TCAAGCAGGC GACCTCGCTG
AAGGGCTTCC ACTCGCCCTA CTTCCTCGAC GGCATCGACT ACAGCTACAC GCCGGACGAC
TACACCCCGA TGAAGACCCT CTACATCGCC ACCTTCAACG GCACCGATTG GGATATCTCG
GAGAAGCCGT TCACGGAGTA A
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| Protein sequence | MNLRTSSVRT SVAAIAAMML TAGAAIAADK KYDPGASDTE IKIGQTVPHS GPGSLYGVLG
RVGEAYFQML NEKGGINGRK IKFITLDDSY SAPKAVEATR RLVEQEEVLA LYGSLGTAPQ
TAVHKYLNSK KVPQLLLNTG ASKWNDPKNF KWTMAGLPLY PTEARILAKH VVAVKPDAKV
AILYQNDDFG RDFLAPFKKV LEEAGGKAKV VAEASYDLTE PTIDSQIINL SKSGADVFFN
ITTGKATSQS IRKIAEIGWK PLHLLSAGST GRSILNAAGL DNAKGIVAIR YSKEVGVPRF
ENDPDVKAFE ELRAKYLPNV DKDNTIAYAG YGQAVTMAEI LRRCGDNLTR ENVIKQATSL
KGFHSPYFLD GIDYSYTPDD YTPMKTLYIA TFNGTDWDIS EKPFTE
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