Gene Rpal_0865 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0865 
Symbol 
ID6408519 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand+ 
Start bp917411 
End bp918505 
Gene Length1095 bp 
Protein Length364 aa 
Translation table11 
GC content68% 
IMG OID642710779 
Productdihydroorotate dehydrogenase 2 
Protein accessionYP_001989898 
Protein GI192289293 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0167] Dihydroorotate dehydrogenase 
TIGRFAM ID[TIGR01036] dihydroorotate dehydrogenase, subfamily 2 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.207108 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATTCGCG CGTTCGATGC CGTCTCGCTG CCGCTGCTGC GCTGGCTCGA TCCGGAGGAT 
GCACACCGGC TGGCGATCCA GGGCCTGAAG CTGTGGCCGC CGGTCAAGCC GCGCCCCGAC 
GATTCCAAGC TCGCGGTGCG CGCGTTCGGA CTCAATTTCT CCAATCCGGT CGGGATCGCC 
GCCGGCTTCG ACAAGAACGC TGAAGCGCCC GATGCGCTGC TCCGGCTCGG CTTCGGTTTC 
GTCGAGGTCG GCACGGTGAC GCCGAAGCCG CAGGCCGGCA ATCCGCGGCC GCGGCTGTTC 
CGGCTCGAAC GCGACGAAGC GGTGATCAAC CGCATGGGCT TCAACAACGA GGGCGCCGAG 
GCGGTGCTGC GCCGGCTGGC GGCGCGCGCG CAATATGGCG GCATCGTCGG CGTCAATGTC 
GGGGCCAACA AGGACAGCGA CGATCGGGTG GCGGACTACG TCAAGCTGAT CGAGACCTTC 
GCGCCGCTGG CGAGCTACTT CACCGTCAAC GTCTCGTCGC CGAACACGCC GGGCCTGCGC 
AATCTGCAGC AGGCGGCGGC GCTCGACGAT CTGCTGGCGC GGGTGATCGA TGCGCGCGAG 
CGGGTGCGGG CGGCGGCCGG CGATACGCCG GTGTTGCTCA AGATCGCGCC CGATCTATCG 
CTCGGCGAAC TCGACGATGT CGTGCATATC GCTCGGTCGC GCCGGGTTGA CGGCATGATC 
GTCGCCAACA CCACGCTGTC GCGCTCGCCG ACGCTGCGCG AGCGGACGAA GATGAATGAG 
CAGGGCGGGC TGTCGGGCCG CCCACTGTTC CGGCTGTCGA CCCGGATGGT GGCGGAGACG 
TTTGTGCGCG CCGAGGGCGC GTTCCCGCTG ATCGGCGTCG GCGGCATCGA TTCCGGCGGT 
GCGGCGCTGA CCAAGATCCG CGCCGGCGCC ACGTTGGTCC AGTTGTATTC GGCGCTGGTC 
TATAAGGGAC TCGGCTTGGT CGAGAGTATC AAGGCCGACC TCGCCTCGAC GCTGCTCCGC 
ACCGGCCGCG ATTCGCTGGC CGAAATCGTC GGCGCCGATG CCCCGATGAT CACTGCGGAA 
GAGTGGCCGG TCTGA
 
Protein sequence
MIRAFDAVSL PLLRWLDPED AHRLAIQGLK LWPPVKPRPD DSKLAVRAFG LNFSNPVGIA 
AGFDKNAEAP DALLRLGFGF VEVGTVTPKP QAGNPRPRLF RLERDEAVIN RMGFNNEGAE 
AVLRRLAARA QYGGIVGVNV GANKDSDDRV ADYVKLIETF APLASYFTVN VSSPNTPGLR 
NLQQAAALDD LLARVIDARE RVRAAAGDTP VLLKIAPDLS LGELDDVVHI ARSRRVDGMI 
VANTTLSRSP TLRERTKMNE QGGLSGRPLF RLSTRMVAET FVRAEGAFPL IGVGGIDSGG 
AALTKIRAGA TLVQLYSALV YKGLGLVESI KADLASTLLR TGRDSLAEIV GADAPMITAE 
EWPV