| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0861 |
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| Symbol | |
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| ID | 6408515 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 914305 |
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| End bp | 915171 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710775 |
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| Product | peptidase C14 caspase catalytic subunit p20 |
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| Protein accession | YP_001989894 |
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| Protein GI | 192289289 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4249] Uncharacterized protein containing caspase domain |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGATCC GGCTGCATCG CTTTTCCCGG CGGACCCTCA CCGCGGCAAC TGCCTTGGTG
GGCGTGGCGT CGCTGGCGAT CGGCGCGCAT GCAGCGCTGT ACAAGCGCCC GGTCGATACG
GCTCGGGCCG CCACGGCGAC GGCCATTGAG ACGAAGACCA CTTCGTCTCG GCTGGCGCTG
GTCATCGGTA ATGCCCACTA CCCTGATGCC GCATCGCCGC TGCTGCAGCC GATCAACGAC
GCCCGCTTGC TTAGCGCCTC GCTGCGCCAT GAAGGCTACG ACGTCGACAT GATCGAGGAC
GCCAGCCGCG ACGAGATCCT TCGCGCGGTC GAGCGGATCA AGGCCCGCGC CGGCAAGGAC
GCGACCGTGA TGCTGTTCTT CGGCGGCTAT GGCATCCAGT CGGGCCGCGA CAACTACATG
ATTCCGGTCG ACGCCAAGAT CTGGACCGAG GCCGACGTGC GCCGCAGCGG CGTCAGCGTC
GAGCAGGTGC TGGCGGAAAT CAAGGCCGCC GGCGCTCACA CCAATCTGGC GGTGCTCGAC
GCCTCGCGCC GTAATCCCTA TGAGCGCCGC TTCCGTGCTT ATTCGCACGG GCTGGCGCCG
ATCGAGACGC CGGCCAATGC GCTGGTGCTG TCGTCGGCGA CGCCGGGGCA GGTGGCGGAC
GACAATAACG GTCCCAACAG CATGGTGGTT GGGGAGCTGG TCGGTTCGCT GTCGTCGCCG
GCAAGCGCGG AAGCCGCTTT CGCCAAGGCG CGGCAGGCGG TGATCAAGGC GACCAACGGC
GCCCAGGTGC CGTCGATGAC CTCGTCGCTG GTTGCGGACG TGCCGTTGGT GCCGGTCGCC
GATGCGACGC CCAACACCGG CGGCTGA
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| Protein sequence | MKIRLHRFSR RTLTAATALV GVASLAIGAH AALYKRPVDT ARAATATAIE TKTTSSRLAL
VIGNAHYPDA ASPLLQPIND ARLLSASLRH EGYDVDMIED ASRDEILRAV ERIKARAGKD
ATVMLFFGGY GIQSGRDNYM IPVDAKIWTE ADVRRSGVSV EQVLAEIKAA GAHTNLAVLD
ASRRNPYERR FRAYSHGLAP IETPANALVL SSATPGQVAD DNNGPNSMVV GELVGSLSSP
ASAEAAFAKA RQAVIKATNG AQVPSMTSSL VADVPLVPVA DATPNTGG
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