Gene Rpal_0855 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0855 
Symbol 
ID6408509 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp906496 
End bp907470 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content68% 
IMG OID642710769 
Productheat shock protein HtpX 
Protein accessionYP_001989888 
Protein GI192289283 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0501] Zn-dependent protease with chaperone function 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTACT TCAAAACCGC TCTCTTGCTG GCCGGCCTGA CCGCGCTGTT CATGGGGGTC 
GGCTATCTGA TCGGCGGCGC CAATGGCGCG CTGATTGCGC TCGTCGTCGC CGCGGCGATG
AACATCTTCA CCTACTGGAA TTCCGACCGG ATGGTGCTGT CGATGTACGG CGCCCAGGAG
GTCGACGAGC GCTCGGCGCC GGATCTGTAC CGAATGGTGG CGGAACTGGC CGGCCGCGCC
TCGCTGCCGA TGCCGCGGGT GTTCATCATG GACAACCCGC AGCCGAACGC GTTCGCCACC
GGCCGCAATC CGGAGAACGC CGCCGTCGCC GTCACCACCG GGCTGATGAA TCAGCTCAGC
CGTGAGGAAC TTGCCGGCGT GGTGGCGCAC GAACTGGCGC ACATCAAGAA CCACGACACG
CTGCTGATGA CCATCACGGC GACGATCGCC GGTGCGATCT CGATGGTGGC GCAGTTCGGC
ATGTTCTTCG GCGGCAACCG CGAGAACAAC AACGGCCCGG GCCTGATCGG CTCGCTGGCG
CTGATGATTC TCGCGCCGCT CGGCGCCATG CTGGTGCAGA TGGCGATCAG CCGGACCCGC
GAATACGCCG CCGACGAGAT GGGCGCGCGG ATCTGCGGCC AGCCGATGTG GCTCGCCTCG
GCGCTCGGCC GGATCGAAGC CGCGGCGCAT CAGGTGCCGA ACTATGATGC CGAACGCTCG
CCGGCGACCG CGCATATGTT CATCATCAAC CCGCTGTCGG GGCAGGGCAT GGACAATCTG
TTCGCCACGC ACCCGTCCAC CGACAATCGG GTCGCCGCAC TGCAGCGGCT CGCGGCCGAG
ATCGGCGGCA GTTCGTATCG TCCGGCCTCG ACGTTCTCTC GCGGCGCCGG CACGGCTGCC
TCGAGCGGCA CCCCGCGCGG CACCGGCCGC AGTCCTTGGG GTGGCCAGCC CCGTGGCCGA
GGTCCGTGGG GTTAG
 
Protein sequence
MSYFKTALLL AGLTALFMGV GYLIGGANGA LIALVVAAAM NIFTYWNSDR MVLSMYGAQE 
VDERSAPDLY RMVAELAGRA SLPMPRVFIM DNPQPNAFAT GRNPENAAVA VTTGLMNQLS
REELAGVVAH ELAHIKNHDT LLMTITATIA GAISMVAQFG MFFGGNRENN NGPGLIGSLA
LMILAPLGAM LVQMAISRTR EYAADEMGAR ICGQPMWLAS ALGRIEAAAH QVPNYDAERS
PATAHMFIIN PLSGQGMDNL FATHPSTDNR VAALQRLAAE IGGSSYRPAS TFSRGAGTAA
SSGTPRGTGR SPWGGQPRGR GPWG