Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rpal_0855 |
Symbol | |
ID | 6408509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhodopseudomonas palustris TIE-1 |
Kingdom | Bacteria |
Replicon accession | NC_011004 |
Strand | + |
Start bp | 906496 |
End bp | 907470 |
Gene Length | 975 bp |
Protein Length | 324 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642710769 |
Product | heat shock protein HtpX |
Protein accession | YP_001989888 |
Protein GI | 192289283 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTACT TCAAAACCGC TCTCTTGCTG GCCGGCCTGA CCGCGCTGTT CATGGGGGTC GGCTATCTGA TCGGCGGCGC CAATGGCGCG CTGATTGCGC TCGTCGTCGC CGCGGCGATG AACATCTTCA CCTACTGGAA TTCCGACCGG ATGGTGCTGT CGATGTACGG CGCCCAGGAG GTCGACGAGC GCTCGGCGCC GGATCTGTAC CGAATGGTGG CGGAACTGGC CGGCCGCGCC TCGCTGCCGA TGCCGCGGGT GTTCATCATG GACAACCCGC AGCCGAACGC GTTCGCCACC GGCCGCAATC CGGAGAACGC CGCCGTCGCC GTCACCACCG GGCTGATGAA TCAGCTCAGC CGTGAGGAAC TTGCCGGCGT GGTGGCGCAC GAACTGGCGC ACATCAAGAA CCACGACACG CTGCTGATGA CCATCACGGC GACGATCGCC GGTGCGATCT CGATGGTGGC GCAGTTCGGC ATGTTCTTCG GCGGCAACCG CGAGAACAAC AACGGCCCGG GCCTGATCGG CTCGCTGGCG CTGATGATTC TCGCGCCGCT CGGCGCCATG CTGGTGCAGA TGGCGATCAG CCGGACCCGC GAATACGCCG CCGACGAGAT GGGCGCGCGG ATCTGCGGCC AGCCGATGTG GCTCGCCTCG GCGCTCGGCC GGATCGAAGC CGCGGCGCAT CAGGTGCCGA ACTATGATGC CGAACGCTCG CCGGCGACCG CGCATATGTT CATCATCAAC CCGCTGTCGG GGCAGGGCAT GGACAATCTG TTCGCCACGC ACCCGTCCAC CGACAATCGG GTCGCCGCAC TGCAGCGGCT CGCGGCCGAG ATCGGCGGCA GTTCGTATCG TCCGGCCTCG ACGTTCTCTC GCGGCGCCGG CACGGCTGCC TCGAGCGGCA CCCCGCGCGG CACCGGCCGC AGTCCTTGGG GTGGCCAGCC CCGTGGCCGA GGTCCGTGGG GTTAG
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Protein sequence | MSYFKTALLL AGLTALFMGV GYLIGGANGA LIALVVAAAM NIFTYWNSDR MVLSMYGAQE VDERSAPDLY RMVAELAGRA SLPMPRVFIM DNPQPNAFAT GRNPENAAVA VTTGLMNQLS REELAGVVAH ELAHIKNHDT LLMTITATIA GAISMVAQFG MFFGGNRENN NGPGLIGSLA LMILAPLGAM LVQMAISRTR EYAADEMGAR ICGQPMWLAS ALGRIEAAAH QVPNYDAERS PATAHMFIIN PLSGQGMDNL FATHPSTDNR VAALQRLAAE IGGSSYRPAS TFSRGAGTAA SSGTPRGTGR SPWGGQPRGR GPWG
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