| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0854 |
|---|
| Symbol | |
|---|
| ID | 6408508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhodopseudomonas palustris TIE-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011004 |
|---|
| Strand | - |
|---|
| Start bp | 905045 |
|---|
| End bp | 906439 |
|---|
| Gene Length | 1395 bp |
|---|
| Protein Length | 464 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 642710768 |
|---|
| Product | adenylate/guanylate cyclase |
|---|
| Protein accession | YP_001989887 |
|---|
| Protein GI | 192289282 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG2114] Adenylate cyclase, family 3 (some proteins contain HAMP domain) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGGGAATT CCGCCAGCCG GGGCAAGATC GCTTCGTGCG GCAGGCCGTC GCGGCTCGCC
GCCGCCGCAA TCCTCAACGA AAGTTCCTGT GTGACCGATC CGACCGCACC ACCCGACGCG
ATGCGCGTCT ATCCCGCCGG CGTCAGCGTC GTCCGCCGCA GCCAGCGCGG CCGTGCCTGT
CTGCCCGCCA GCATCACGCT GGCCGAGCTG GAAACCTGGC TGCTGCACGA CGCCGCGGCC
GAGCCAGAAA TGCTGCTGAC GTTCGAATCG CTGATGTGGC GGATGACCGC GGTCGGGCTG
CCGGTGCATC GCGCCACGCT GCACATCCGC ACGCTGCATC CGCAGCTGCT CGGCTTCGCC
TGGAACTGGC GCGCCTCCGA CGGGCTGTGC GACGAAGTCC AGGTCAACCA ATCGACCGCC
GACACCGACG CATTCCGGCT CAATCCGCTG CACAACCTGT TCCAGGGCGG CAAGGCGATC
CGGCGCAATC CGCAGGACGC CGCCGCGCAG GCGGAATTCC CGATCATGCG CGACCTCGCG
GCCGGCGGTT ACACCGAGTA CCTGGCGCTG CCGATGGGCG GCGACCGCTT CCGCCACGCC
GTTACGTTGG CAACCATGCA GCCCGGCGGC TTCACCGACG AGCACCTCGC GCTGTTTCAG
CGGCTGCTGA CGCTGTTCGG CCTGCATGTC GGCCGCCACG TCGCCACCCG GATCGCCATC
AACGCGCTCG GCGCCTATCT CGGCCCGGTG GCCGGCGCCA AGGTGCTGAG CGGCGACATC
AAGCGCGGCG CCGGCGAGCC GATCCGCGCC ATCATCTGGA TGTCGGACCT GCGCGGCTTC
ACCGATCTGT CCGACCGGCT GTGCGGCAAC GACATGATCG CGCTGCTGAA CGCTTACTTC
GAGGTGTTCG CCGACGCGGT GCTGCGCAAC GGCGGCGACG TCCTGAAGTT CATCGGTGAC
GGGCTGCTGG CGGTGTTTCC GCTCGGCGAT GATTCGCGCG TCGCCGGTAA CGCGGCGCTG
ACGGCCGCGA TCGAGGCGCA GGCGGGGCTG GGACGACTCA ACCTGGTCGA TCCGGCCGGC
GTGAATTGCG AAGGCTGGCG TCCGCTCCGC GCTGGCATCG CGCTGCACGA AGGCGAAGTG
TTCTTCGGCA ATATCGGCGC CGCCGAACGC CTCGACTTCA CCGTGATCGG ACCGGCGGTG
AACGAAGCCA GCCGGGTCGA GGCGCTGCAA AAGAGCACCG GGCGCAGTAT CCTGGTGACG
GCGGCGGCCG CGACCCATAT CGACGCACCG CTGGAGCCGC TCGGGGACTA CCCGCTGCGC
GGCGTCACCG TGCCGATGAC GATCTTCAGC CCGCCCGAAC AGCCGCTCCG GCAGCCGCTG
GCCGCTGCGT CATAA
|
|---|
| Protein sequence | MGNSASRGKI ASCGRPSRLA AAAILNESSC VTDPTAPPDA MRVYPAGVSV VRRSQRGRAC
LPASITLAEL ETWLLHDAAA EPEMLLTFES LMWRMTAVGL PVHRATLHIR TLHPQLLGFA
WNWRASDGLC DEVQVNQSTA DTDAFRLNPL HNLFQGGKAI RRNPQDAAAQ AEFPIMRDLA
AGGYTEYLAL PMGGDRFRHA VTLATMQPGG FTDEHLALFQ RLLTLFGLHV GRHVATRIAI
NALGAYLGPV AGAKVLSGDI KRGAGEPIRA IIWMSDLRGF TDLSDRLCGN DMIALLNAYF
EVFADAVLRN GGDVLKFIGD GLLAVFPLGD DSRVAGNAAL TAAIEAQAGL GRLNLVDPAG
VNCEGWRPLR AGIALHEGEV FFGNIGAAER LDFTVIGPAV NEASRVEALQ KSTGRSILVT
AAAATHIDAP LEPLGDYPLR GVTVPMTIFS PPEQPLRQPL AAAS
|
|---|
| |