Gene Rpal_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0842 
Symbol 
ID6408496 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp891569 
End bp891994 
Gene Length426 bp 
Protein Length141 aa 
Translation table11 
GC content65% 
IMG OID642710756 
Producthypothetical protein 
Protein accessionYP_001989875 
Protein GI192289270 
COG category[S] Function unknown 
COG ID[COG3304] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCTCCCG TCTCGCTCCT GCTGAATATC CTTTGGATCG CGCTCGGCGG CTTCTGGATG 
GCTGTCGGCT GGGCGGTTGC GGCTGTCATC ATGGCAATCA CGATCATCGG TTTGCCGTGG
GCGCGCGCGG CCTTCAGTAT CGGCGTCTAC ACGCTGTTTC CGTTCGGGCA GACCGCCGTG
CCCCGGGAAG CCCTCACCGG CCGCGAAGAT ATCGGCACCG GCCCGCTCGG GGTGATCGGC
AACGTCATCT GGCTGGTGTT CGCTGGCTGG TGGCTCGCCA TCGGGCATCT CGTCACCGCC
GTGCTGCTCG CCGTGACGAT CATCGGAATT CCGTTCGCCT GGGCCCACCT GAAGCTCGCC
GGCATCGCGC TTTGGCCGAT CGGCAAGGTC ATCGTTCCGA TCGACGACCT CGGCCTCAGA
AGGTGA
 
Protein sequence
MSPVSLLLNI LWIALGGFWM AVGWAVAAVI MAITIIGLPW ARAAFSIGVY TLFPFGQTAV 
PREALTGRED IGTGPLGVIG NVIWLVFAGW WLAIGHLVTA VLLAVTIIGI PFAWAHLKLA
GIALWPIGKV IVPIDDLGLR R