| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0833 |
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| Symbol | |
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| ID | 6408486 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 879448 |
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| End bp | 881046 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642710746 |
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| Product | extracellular solute-binding protein family 5 |
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| Protein accession | YP_001989866 |
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| Protein GI | 192289261 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.54369 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGACTTA AGAGTTCATG GGTGCTGGGC GCGTTGTTTG CTGCGGCGAG CGCAATCGGT
GCGGCGCGTG CGGAAACAGT GGTGCGTTAC GGGATCTCGA TGGCCGATAT TCCGCTGACC
ACGGGGCAAC CGGATCGCGG CGCCGGCGCG TATCAGTTCA CCGGCTACAC GATCTATGAT
CCGCTGGTGG CGTGGGAGAT GAACGTCGGC GATCGGCCCG GCAAGCTGGT GCCGGGGCTC
GCCACCGAAT GGAAGGTCGA TGATGCCGAC AAGACCAAGT GGCGCTTCAC CTTGCGCAAG
GGCGTCAAGT TTCACGACGG CAGCGACTTC AACGCCGATG CGGTGATCTG GAATCTCGAC
AAGGTTCTCA ACGACAAGGC GCCGCAATTC GACAAGCGCC AGAGCGCGCA GGTGAAGACC
CGGCTGCCGT CGGTGAAGAG CTACGCCAAG ATCGACGATT CCACCGTCGA GATCACCACC
AAGACGGTCG ACTCGTTCTT TCCCTATCAG ATGCTGTGGT TCCTGGTGTC GAGCCCGGCG
CAGTATGAGA AGGTCGGAAA GGACTGGGAT AAGTTCGCCG CCAATCCGTC GGGCACCGGT
CCCTTCAAGC TCACCAAGCT GGTGCCGCGC GAGCTCGCCG AGCTCACCAA GAACGATGAG
TATTGGGACA AGTCGCGGCT GCCGAAGACC GACAAGCTGG TGCTGATCCC GATGCCTGAA
GCGTTGACCC GCACCAATGC ACTGCTGGCC GGGCAGGTCG ATCTGATCGA GACGCCTGCG
CCCGACGCGG TGCCGCAGCT CAAGGCGGCC GGCATGAAGA TCGTCGACAA CGTCACACCG
CACGTCTGGA ACTATCACCT CAGCGTGCTG CCCGGCTCGC CCTGGACCGA CGTGCGCCTG
CGCAAGGCGC TCAATCTCGC GATCGATCGC GAGGCGGTGG TCGGACTGAT GAACGGCCTC
GCCAAGCCGG CGGTCGGACA GGTCGATCCG TCGAGCCCGT GGTTCGGCAA TCCGTCGTTC
AAGATCAAAT ACGATCTGGC GGAAGCCAAG AAGCTGGTGA AGGAAGCCGG CTATTCGCCG
GAGAAGCCGC TGAAGACCAC CTTCATCATT GCCAATGGCG GCACCGGCCA GATGCTGTCG
CTGCCGATGA ACGAGTTCCT GCAGCAGAGC TTCAAGGAGA TCGGCATCGA CGTCGAGTTC
AAGGTGGTCG AACTCGAAGT GCTGTACACC GCGTGGCGCA AGGGGGCGGC CGATGAATCC
AACGCCGGCA TCACCGCCAA CAACATCGCC TACGTCACCT CCGATCCGCT GTATGCGATC
GTGCGGTTCT TCCATTCCGG GCAGGTGGCG CCGGTCGGCG TCAACTGGGG CGGCTACAAG
AATCCGAAGG TGGATGCGCT GATCGACGAC GCCAAGACCA CGTTCGAGCC GAAGAAGCAG
GACGAACTGC TGGCGCAGGC GCACTCGCTG ATCGTCGACG ACGCAGCGCT GGTGTGGGTG
GTGCACGATA CCAATCCGCA CGCGCTGTCG CCGAAGGTGA AGAGCTTCGT GCAGGCCCAG
CACTGGTTTC AGGACCTGAC CACGATTGGG CTGCAGTAA
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| Protein sequence | MRLKSSWVLG ALFAAASAIG AARAETVVRY GISMADIPLT TGQPDRGAGA YQFTGYTIYD
PLVAWEMNVG DRPGKLVPGL ATEWKVDDAD KTKWRFTLRK GVKFHDGSDF NADAVIWNLD
KVLNDKAPQF DKRQSAQVKT RLPSVKSYAK IDDSTVEITT KTVDSFFPYQ MLWFLVSSPA
QYEKVGKDWD KFAANPSGTG PFKLTKLVPR ELAELTKNDE YWDKSRLPKT DKLVLIPMPE
ALTRTNALLA GQVDLIETPA PDAVPQLKAA GMKIVDNVTP HVWNYHLSVL PGSPWTDVRL
RKALNLAIDR EAVVGLMNGL AKPAVGQVDP SSPWFGNPSF KIKYDLAEAK KLVKEAGYSP
EKPLKTTFII ANGGTGQMLS LPMNEFLQQS FKEIGIDVEF KVVELEVLYT AWRKGAADES
NAGITANNIA YVTSDPLYAI VRFFHSGQVA PVGVNWGGYK NPKVDALIDD AKTTFEPKKQ
DELLAQAHSL IVDDAALVWV VHDTNPHALS PKVKSFVQAQ HWFQDLTTIG LQ
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