| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0829 |
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| Symbol | |
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| ID | 6408482 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 874475 |
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| End bp | 875533 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710742 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_001989862 |
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| Protein GI | 192289257 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG4608] ABC-type oligopeptide transport system, ATPase component |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.00153386 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAAAA TTGTCTCCGC AATCGCAGAG GTCGAAAAGT TCGAGCCGAT CGAAGACATA
GGCGGCGCCG CCCAGCCGCT GTTACAGGTC AACGGTCTCA CCAAGCATTT CCCGGTGCGC
GGCACCGGGC TGTTCGGCGG CGCCAAGACG GTGCGGGCGG TCGACGACGT CACCTTCTCG
ATCGCCAAGG GCGAGACGCT GGGCATCGTC GGCGAGTCCG GCTGCGGCAA GTCCACGACC
GCGCGGCTGT TGATGCACCT GATGCCGGTG ACCGCCGGCG AGATCATCTT CGACGCCCGC
CAGGTCGGGC GCGAGCTGAG CTTGCGCGAA CTGCGCCGCG GCATGCAGAT GGTGTTTCAG
GACAGCTACG CGTCGCTCAA CCCGCGGCTG ACGATCGAGG ACTCGATCGC GTTCGGCCCG
AAAGTCCACG GCATGAGCGA TGCCAGCGCT CGTGCGCTGG CGCGCGAACT GCTGGGCAAA
GTCGGCCTGC GCCCCGAGAA CTTCGCGCAT CGCTATCCGC ACGAGGTTTC CGGCGGCCAA
CGCCAACGCG TCAACATCGC GCGCGCGCTC GCCCTGTCGC CGCGACTGGT GATCCTCGAC
GAGTCGGTCT CCGCGCTCGA CAAATCGGTC GAGGCGCAGG TGCTGAATCT GCTCGCGGAC
CTGAAGCGCG AATTCGGCCT GACCTATCTG TTCATCAGCC ACGACCTCAA CGTGGTGCGC
TACATCTCCG ACCGCGTTCT GGTGATGTAT CTCGGCGAAG TCGTCGAACT CGGTCCGGTG
GACGAAGTAT GGGACGCGCC GGCGCATCCT TATACGCGGG CTCTGCTCGC CGCGATGCCG
TCGTCCGATC CGGATCGCCG CACCGAGGTT CCGCCGATCA CCGGCGATCC GCCGAACCCG
ATCGATCCGC CGGCCGGCTG TCGTTTTCAT CCGCGCTGTC CGTTCGCCGA GGCGTTATGC
TCGCAGGCCA AGCCGAAGCT GTCGTCAATC GGCGACAGCG GCCATCAGGC CGCGTGTTTC
ATGGCGATCC CCGGCTCGGG ACATAGCCGC GCCCCATAA
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| Protein sequence | MSKIVSAIAE VEKFEPIEDI GGAAQPLLQV NGLTKHFPVR GTGLFGGAKT VRAVDDVTFS
IAKGETLGIV GESGCGKSTT ARLLMHLMPV TAGEIIFDAR QVGRELSLRE LRRGMQMVFQ
DSYASLNPRL TIEDSIAFGP KVHGMSDASA RALARELLGK VGLRPENFAH RYPHEVSGGQ
RQRVNIARAL ALSPRLVILD ESVSALDKSV EAQVLNLLAD LKREFGLTYL FISHDLNVVR
YISDRVLVMY LGEVVELGPV DEVWDAPAHP YTRALLAAMP SSDPDRRTEV PPITGDPPNP
IDPPAGCRFH PRCPFAEALC SQAKPKLSSI GDSGHQAACF MAIPGSGHSR AP
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