Gene Rpal_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0826 
Symbol 
ID6408479 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand- 
Start bp871880 
End bp872857 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content69% 
IMG OID642710739 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_001989859 
Protein GI192289254 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0205717 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAACC TGGTCGACAT CCGCGATCTC AACGTTCGCT TCACCGGCGA GCGGACCGTG 
TACGCCATCA ACGACCTCAA CCTCACGCTG GGCCAGGGCG AGGTTCTCGG CCTGCTCGGC 
GAGTCCGGCT CGGGCAAGAG CGTGACGCTG CGCGCCCTGA TGCGGCTGCT GCCAAAGAAG 
CGCACCGCGA TCTCCGGCAG CATCCGGGTC GCCGGCCAGG ATGTGCTCGC ACTCGATGAC 
GAAGCGCTGT CGACCTTCCG CGGCCAGACC GTGTCGATGA TCTTCCAGGA GCCGGCACTG 
GCGCTTGATC CGGTCTACAC GGTCGGCCAG CAGATCGCCG AGTCGGTGAT GCGGCACGAA 
GGCAAGAGCC AGCGCGAGGC GATGGCCCGC GCGCTCGAAA TGCTCGAGGT GGTCCGCATC 
CCGTCGGCGA AGCGGCGGCT CGACGCCTAT CCGCACGAGA TGAGCGGCGG CATGCGGCAG 
CGCGCGATGA TCGCACTGGC GCTCGCCTGC AAGCCGAAGA TCCTGCTCGC CGACGAACCC 
ACCACCGCGC TCGACGCCAC CGTGCAGATC CAGATCCTGC TGCTGCTACG CGAATTGCAG 
CGCGAGTTCG GCATGTCGGT GATCTTCGTC ACCCACGATA TCGGCGTGGC GATCGAAATC 
TGCGACCGCG TCGCCGTGAT GTATGCCGGC CAGACCATCG AGCAGGGCTC CTTGCGCGAC 
ATCGTCCGTG ATCCGCAGCA TCCTTACGCG CAGGGCCTGC TCGCCTCGAC CGTGCACGGC 
GCCAAGCGCG GCGCGCGGCT GGAGACGATT CCGGGCGCAC CGCCGTCGCT CGATACCAAG 
CCCGTCGCCT GCTCGTTCGC GCCGCGCTGC GCCCATGCGC AGCCGCGCTG CTCCGCCGGC 
CTGCCGCCCG AAGTCGCGCT CGGCCCGGGC CGGATGGCGC GCTGCATCCT GGCCGAGCCG 
GCCGCCGTGG CCGGGTAG
 
Protein sequence
MSNLVDIRDL NVRFTGERTV YAINDLNLTL GQGEVLGLLG ESGSGKSVTL RALMRLLPKK 
RTAISGSIRV AGQDVLALDD EALSTFRGQT VSMIFQEPAL ALDPVYTVGQ QIAESVMRHE 
GKSQREAMAR ALEMLEVVRI PSAKRRLDAY PHEMSGGMRQ RAMIALALAC KPKILLADEP 
TTALDATVQI QILLLLRELQ REFGMSVIFV THDIGVAIEI CDRVAVMYAG QTIEQGSLRD 
IVRDPQHPYA QGLLASTVHG AKRGARLETI PGAPPSLDTK PVACSFAPRC AHAQPRCSAG 
LPPEVALGPG RMARCILAEP AAVAG