| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0825 |
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| Symbol | |
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| ID | 6408478 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 870381 |
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| End bp | 871748 |
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| Gene Length | 1368 bp |
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| Protein Length | 455 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642710738 |
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| Product | signal transduction histidine kinase |
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| Protein accession | YP_001989858 |
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| Protein GI | 192289253 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3920] Signal transduction histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.111815 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCAACC AGCCCAAGCC GCTCACGACC GCTCATCATC AGTTCGCGGC GATCGTTCAG
AATTCATTCG ACGCCATCGT TTCCAAAGAC GTGGAAGGAA ACGTGCAGAG CTGGAACCCG
GCGGCCGAGC AGATTTTCGG CTGGACCGCC GACGAGATGA TCGGGAACTC GATCCGCGTC
CTGATCCCGC CGGACCGCCA GCACGAGGAA GACGACATCC TGCAGCGGAT CCGGACCGGC
GAGATGGTGC CGAAATTCGA GACCGAACGG CTGCATAAAA GCGGGCGGCG GATTCATGTC
GCCGTGACGG TATCGCCGCT TCGTGATCCT GACGGCCGCA TCGTCGGTGC CTCGAAGATC
GCTCACGATA TCACTGAGAC CGTGGAGATC CGCCGCCGGC TGGTCGCCAG CGAACACCAG
TTCCGGAGCC TCGCCAATTC GATCCCGCAG CTCGCCTGGA TCGCCGAGAG CGACGGCACC
GTGTTCTGGT ACAATGATCG CTGGTTCGAC TACACCGGCA CCACGCTCGA ACAGCTGCAA
GGCTCGGGTT GGACAGCGCT GCACCACCCC GATCATCTCG AAAGGGTGCG CAGCAAGCTG
CAGCACAGCT GGGACACCGG CGAGGCGTGG GAAGATACGT TCCCGCTGCG TGGCAGAGAC
GGCGAGTATC GCTGGTTTTT GTCGCGCGCG ATGCCGCTGC GCGACGACAG CGGCGAGGTG
TGGCGTTGGT TCGGTACCAA CACCGACATC ACGGTGCAGC GCCAGCATGA GCAGCAGATC
CAAATGCTGA TGGGTGAGAT CAATCACCGT GCCAAGAACA TGCTGGCGGT GGTGCAGGCG
ATGGTGATGC GCACCGCAGA TCGCAGCTTC GCCGAAAGCC TCGGCGCAAG GCTGCAGGCG
CTCAGCCGCA ACCAGGACCT GCTGATCAAG CGCAACTGGT CCGGAACGCC GATCGGTGAA
TTGATCGAAT CGCAGCTCGC CGCGGTGAAC GACCTGATCG GCACCCGCGT GCTGATCGAG
GGCGAGCGCG AGTTGTTGCT GTCGCCGGTC GCCTCCGAAA CGATCGGGCT GGCGATCCAC
GAGCTGACCA CCAATGCGAC CAAGTATGGC GCGCTCTCGA ATGCGGACGG CACCGTGCGG
ATCGCTTGCG AGATCCGCCA TACAGTCGAT GGCCGCAAGC TCGACCTGAT TTGGCATGAG
CAAGGCGGCC CGCCGGTCGG CGAGCCGAAC CGTGCCGGCT TCGGCACTGT GATGATCGAC
CGAAATCCCC GCTCGGCGCT CGGCGCCGAC GTCGAGATCA GCTACCCCGA ATCCGGCCTG
CGGTGGTGCC TGAATGCTCC GCTCGACCGT CTCGTTGCAA CGCCATAA
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| Protein sequence | MPNQPKPLTT AHHQFAAIVQ NSFDAIVSKD VEGNVQSWNP AAEQIFGWTA DEMIGNSIRV
LIPPDRQHEE DDILQRIRTG EMVPKFETER LHKSGRRIHV AVTVSPLRDP DGRIVGASKI
AHDITETVEI RRRLVASEHQ FRSLANSIPQ LAWIAESDGT VFWYNDRWFD YTGTTLEQLQ
GSGWTALHHP DHLERVRSKL QHSWDTGEAW EDTFPLRGRD GEYRWFLSRA MPLRDDSGEV
WRWFGTNTDI TVQRQHEQQI QMLMGEINHR AKNMLAVVQA MVMRTADRSF AESLGARLQA
LSRNQDLLIK RNWSGTPIGE LIESQLAAVN DLIGTRVLIE GERELLLSPV ASETIGLAIH
ELTTNATKYG ALSNADGTVR IACEIRHTVD GRKLDLIWHE QGGPPVGEPN RAGFGTVMID
RNPRSALGAD VEISYPESGL RWCLNAPLDR LVATP
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