| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0817 |
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| Symbol | |
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| ID | 6408470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | - |
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| Start bp | 859972 |
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| End bp | 861594 |
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| Gene Length | 1623 bp |
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| Protein Length | 540 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 642710730 |
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| Product | cytochrome C family protein |
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| Protein accession | YP_001989850 |
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| Protein GI | 192289245 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01905] doubled CXXCH domain
[TIGR03508] decaheme c-type cytochrome, DmsE family |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGGGCT CTCGGGGGGC GGCGGCTGCG CGCGACCAAA GTCGGCGCGG CCGCCGGAGC
TGGATCTCGT CGCTGTTCGT ATCGATTGCG CTGGCCTGGG GGACCTGGCC AGCCGGCGCC
GAACCGGCGA TGGTCGGACA CACCGCCTTG CCGCATGACG GCCAAGTCGG CGCGGTCGAT
CCGTCGGTCA ATGCGCTGGT CGACTACGTG CGCGGCCTGC AGAGCGCCGG CAAGACCGAA
CAGAACTTCA CGCCGGTGCC TGCCCACGGC CTCGCGCTTG GTGACGGACA TGGCGGCGGG
CATGGCGGCA TCTCGGGCCA CGGCGCCTCC GCGCATGGTT CGCCGCACGG TGCGGCAGCA
GCCGGCCCGC GTTTCGACAC GCGCTTTGCC GGGCATGGTT CGACCGAGAA CTTGCTGGCG
CTTCCCCAGA TCGACGGTGG CCCACAGCTC GAGCAGAGCC TGCGGTTTAC GGCTTCGCTG
CGCCTCACCA CCCTCAGCGA AAAGCGCATC CTGCGATCTC ACCAGACCCG CCACACGCTG
GCGGCGCGGC TCGCCCGCGA GCCGGACTAC GTGGCGGAGA TGCCGGAGCC GGTGCGCGAT
GCCGCCACGG TAACCACCTG GGTGGCGCTG GAAAATTTCG ACGACACCAT CGAGCAGCCG
AAGCAGTTCG ACTTCATCGA GATCCTCGCC GCCAAGGCGG ATGATTCCCG GCCGGTCCTG
ATGGTCGCGA CGCGCGAGCC GAGGGCTGCG GCCGCCGGGC GCGCGCCGAT GGTGGCACCC
GCACCCGGCG ATCCCGATGG CCGTTACTTC GTCGGCTCCA AGCCGTGCGA GACCTGCCAC
GCAGGCCTGT TCGACGAGTT CCAGCAGACC GTGATGGGCC GCAACATCAA GTCCGGCAAG
GTCACGCCGC AGGGCAAGAT GGAATGCGAG ACCTGCCACG GCCCCGGCTC GGCGCACGTC
AATGGCGGCG GCGGCCGCGA GAAGGGCGGC ATCCGCTCGT TCCGGCCGAC CGACAGCCGC
GGCTTCGACG TCGCCGAGGC CAACAGCGTC TGCCTGAGCT GCCACGAGAA GGGCGACCAG
ACCTATTGGC AGGGGTCGCA GCACGAGACC CGCGGCCTCG CCTGCGTCAA CTGCCACACC
GTGATGCGCA AGGTGTCGCC GCGCAATCAG CTCAAGACCG TGCAGGTGAT GGATACCTGC
TTCCAGTGCC ACAAGGATCG CAAAGCGCAG GTGCAGCGCA GCTCGCACAT GCCGATCCGC
GAAACCAAAA TCACCTGCGT CAATTGCCAC AACCCGCACG GCAGCGCGAC CGAGAAGCTG
CTGCGCGAGG CGACCGTCAA CGACACTTGC TACACCTGCC ACGCCGACAA GCGCGGACCG
TTCCTGTTCG AACATCCGCC GGTCCGCGAG AACTGCCTGA ACTGCCACGA ACCGCACGGC
TCCAACCACG AGTCGCTGCT GATCGTCGCG CGGCAGCGGC TGTGCCAGCA GTGCCATACC
AACCCGCACA ACCAGCCAGG TCTGCCGACG TCGGCGCGCT GGGCGGTCGG GAATGCCTGC
CAGAATTGTC ACAACAACAT CCACGGCTCC AACGCGCCGT CCGGATCGCG CTGGCACCGA
TAG
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| Protein sequence | MGGSRGAAAA RDQSRRGRRS WISSLFVSIA LAWGTWPAGA EPAMVGHTAL PHDGQVGAVD
PSVNALVDYV RGLQSAGKTE QNFTPVPAHG LALGDGHGGG HGGISGHGAS AHGSPHGAAA
AGPRFDTRFA GHGSTENLLA LPQIDGGPQL EQSLRFTASL RLTTLSEKRI LRSHQTRHTL
AARLAREPDY VAEMPEPVRD AATVTTWVAL ENFDDTIEQP KQFDFIEILA AKADDSRPVL
MVATREPRAA AAGRAPMVAP APGDPDGRYF VGSKPCETCH AGLFDEFQQT VMGRNIKSGK
VTPQGKMECE TCHGPGSAHV NGGGGREKGG IRSFRPTDSR GFDVAEANSV CLSCHEKGDQ
TYWQGSQHET RGLACVNCHT VMRKVSPRNQ LKTVQVMDTC FQCHKDRKAQ VQRSSHMPIR
ETKITCVNCH NPHGSATEKL LREATVNDTC YTCHADKRGP FLFEHPPVRE NCLNCHEPHG
SNHESLLIVA RQRLCQQCHT NPHNQPGLPT SARWAVGNAC QNCHNNIHGS NAPSGSRWHR
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