| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rpal_0814 |
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| Symbol | |
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| ID | 6408467 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Rhodopseudomonas palustris TIE-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011004 |
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| Strand | + |
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| Start bp | 855316 |
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| End bp | 856842 |
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| Gene Length | 1527 bp |
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| Protein Length | 508 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 642710727 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_001989847 |
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| Protein GI | 192289242 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | [TIGR01923] O-succinylbenzoate-CoA ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCTTTG CTTACTTCGA CTGGATCGCC CATCACGCCG AGGTCCGCCC CGAGCGGATC
GCGGTGGTCG ATCTCGCCAC CAGTCGCAAG ATCAGCTACC GCGCAATGGA CGAACGGGTC
GACCGGTTGG CTGCCCATCT CGCTGCGCTT GGCGTTGGCC GTGGCGACCG GGTCGCGGTG
CTGGCGCTGA ATGCGGTCGA GACGCTGGAG GTGCAGTTCG CCTGCTTCCG GCTCGGCGCG
ATCTTCGTGC CGCTTAATGT CCGGCTCACC GTGCACGAAC TATCCTACAT CGTCGGCGAC
GCCGCGCCGC GGGTGCTGGC GCATGACGAC GAGCTGGCTC CGATGGCGAC GGAGTTGAAG
GCGGCCTGCA GCGTGCCGCA TCTGTTGGCG TTCGGCCCGG CCTACGAGGC GGCGCTGGCG
GCCTCGCCGC TGCTCGGAGC CTCCGAGCCT GTGACGCTCG ATGACGTCTC CACCATCATG
TACACCTCCG GCACCACCGG AAAGCCGAAG GGCGCCATGA TCACCCATGG AATGACCTTC
ATCAACGCGG TCAATCTCGG CATTCCGGCG TTCATTTCGC AACGCACGGT GTTTCTCTGC
GTGCTGCCGC TGTTCCACAC CGGCGGGCTC AATTGCTACA CCAATCCGGT GCTGCACGCC
GGCGGCACCA CATTGTTGAT GCGCGCGTTC GATCCGGGCG CAGCGCTGTC GATTATCGGT
GATCCGTCGG TCGGGCTGAC GCATTTCTTC GGGGTCCCCT CGATCTATCA GTTCATGTGC
CAGCATGCGG CGTTCGCGGC GACCGATCTG TTGCGGCTGC AGATCGCCGG GGTCGGCGGC
GCTCCGATGC CGGTACCCCT CTTGAAGATC TGGCAGGAGC GTGGCTGCGC CTTGGTCCAA
GGCTACGGCA TGACCGAGAC CAGCCCGGCG GTGCTGATGC TCGATGCCGA CGATGCCGCG
CGCAAGGCCG GCTCGGCCGG CAAACCGGTG CTGCACGCCG ATCTCAAGAT CGTCGGCCCA
GACGGCGCGC CGGTGAAACC GGGCGAGATG GGCGAACTCT GGGTGAAGGG CCCGAACATC
ACCCCCGGCT ATTGGAACAG GCCGGACGCC AATCGCACCT CGTTCACCGA CGGCTGGCTG
CACACCGGCG ACGCGGCGCG GGTCGACGAC GAAGGCTTCT ATTACATCGT CGACCGCACC
AAGGACATGT ACATCTCGGG CGGCGAGAAC GTATACCCGG CCGAGGTCGA GGACGTGCTG
TACCAATTGC CGGAGATTGC CGAAGCGGCA GTGATCGGCG CGCCTGATCC GCAATGGGGC
GAAACCGGCG TCGCGGTGGT CGCGCTCAAA CCCGGCCAGG AACTGAGCGA GGCGAAGCTG
CTGGCGCACT GCCGCGAGCG GCTGGCGCGG TTCAAATGTC CGCAGCGCGT CAGCTTCGTC
GAAGCGCTGC CGCGCAACGC CACCGGCAAG GTGCACAAGC CGACGCTGCG CGAACGCATT
CTGGTGCGGG AGACCGCCGA CGCGTGA
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| Protein sequence | MSFAYFDWIA HHAEVRPERI AVVDLATSRK ISYRAMDERV DRLAAHLAAL GVGRGDRVAV
LALNAVETLE VQFACFRLGA IFVPLNVRLT VHELSYIVGD AAPRVLAHDD ELAPMATELK
AACSVPHLLA FGPAYEAALA ASPLLGASEP VTLDDVSTIM YTSGTTGKPK GAMITHGMTF
INAVNLGIPA FISQRTVFLC VLPLFHTGGL NCYTNPVLHA GGTTLLMRAF DPGAALSIIG
DPSVGLTHFF GVPSIYQFMC QHAAFAATDL LRLQIAGVGG APMPVPLLKI WQERGCALVQ
GYGMTETSPA VLMLDADDAA RKAGSAGKPV LHADLKIVGP DGAPVKPGEM GELWVKGPNI
TPGYWNRPDA NRTSFTDGWL HTGDAARVDD EGFYYIVDRT KDMYISGGEN VYPAEVEDVL
YQLPEIAEAA VIGAPDPQWG ETGVAVVALK PGQELSEAKL LAHCRERLAR FKCPQRVSFV
EALPRNATGK VHKPTLRERI LVRETADA
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