Gene Rpal_0810 details

Gene Information

• Locus tag: Rpal_0810
• ID: 6408463
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 851024
• End bp: 851620
• Gene Length: 597 bp
• Protein Length: 198 aa
• Translation table: 11
• GC content: 62%
• IMG OID: 642710723
• Product: putative cytochrome c4 precursor
• Protein accession: YP_001989843
• Protein GI: 192289238
• COG category: [C] Energy production and conversion
• COG ID: [COG2863] Cytochrome c553

Plasmid Coverage information

• Num covering plasmid clones: 28
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGACTCGCC TGCTTGCTGC GCTGTCGCTG TCGTTCTGTT TCAGTTTGCT TGCGTCTCCT 
CTCGTCGCCG GCGATATCGA GGCCGGCAAG GCCAAGGCCG GGGTCTGCGC CATCTGTCAT 
GGCGAGAACG GGATCTCGAA AATGGAGTAC ACCCCGTCGC TGGCCGGACA GCCCGATCTC 
TACATTCAAT GGCAGCTGGT GTTCTTCCGA GCCGGCACCC GGGAGAACGC CAGTATGAGG 
TCAGTGGTCG AAGATCTCAG CAACGAGGAC ATCCGCAATC TCGGTGCGTA TTTCGCGTCA 
CTGCCGCCAA TGAAGAATCC GAAGCCGGAT GAAAAGCCGG AGCTGTCGCG CAAGGGGGCA 
GAGGCCGCGG TGGGCCGGCG CTGCGCGTCC TGCCATACCG ACAGTTTCGC CGGCACCAAA 
GCGACGGCGC GGCTCGCCGG CCAGCGCGAA GAATATCTGA TCAAGGCGCT GAACGAATTC 
AAATCCGGCC AGCGCTCTGG GGGCGCGATG GCCGCGATGG CCGACGTCGC CTATCAGCTC 
AGCGAAGAGG AAATCTACGC GCTGGCGCAC TACCTCGCCC ATCTGAATGG CGAGTAG 

 

Protein sequence

MTRLLAALSL SFCFSLLASP LVAGDIEAGK AKAGVCAICH GENGISKMEY TPSLAGQPDL 
YIQWQLVFFR AGTRENASMR SVVEDLSNED IRNLGAYFAS LPPMKNPKPD EKPELSRKGA 
EAAVGRRCAS CHTDSFAGTK ATARLAGQRE EYLIKALNEF KSGQRSGGAM AAMADVAYQL 
SEEEIYALAH YLAHLNGE