Gene Rpal_0801 details

Gene Information

• Locus tag: Rpal_0801
• ID: 6408454
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Rhodopseudomonas palustris TIE-1
• Kingdom: Bacteria
• Replicon accession: NC_011004
• Strand: +
• Start bp: 839356
• End bp: 840045
• Gene Length: 690 bp
• Protein Length: 229 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 642710714
• Product: hypothetical protein
• Protein accession: YP_001989834
• Protein GI: 192289229
• COG category: [U] Intracellular trafficking, secretion, and vesicular transport
• COG ID: [COG4961] Flp pilus assembly protein TadG

Plasmid Coverage information

• Num covering plasmid clones: 24
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCCGCC GATCATTTCC CGTCAGGAGC TTGCAGGCCG ACGTCGATGC CGTCGCGGCG 
ACAGAGTTCG CGATCGTGGT GCCGTTCCTT CTGTTGCTGT TCATCGGCGG AGTCGAGCTC 
GCGAACGGAA TGGCGATCAG CGTCAAGGTC AGCGCGACGG CCCACTCCGT GGCTGACATG 
GTGACGCAGA ATACTTCGCT CAGCACCACA TCGATGCAGA ACATTCTCAC CGGGGCAACG 
GCAACGATCG CGCCATATTC CGTCAATGAC AGCAGTGGCA AGTCGCTTCT GACGGTCACT 
GTGTCTGAGG TTTCCAGCGA CGCAAATGGC AACCTGACCC TGCAGTGGAG CCGCTCGTTT 
AACGGCGCGA CCTTCGGGTC GGGGAGAACC AGTTTGTCCG GCCTGACGGT GCCGACGTCG 
CTGAACGGGA CCGTCGGCAA CGCGAGTAAT CCAAACAACC AGAACGATCA GGTCTCGTTC 
ATCGTCGGCG AAGTATCGTA CGCCTATACG CCCAATCTCG GGTTCACGAT CAGCGGCACC 
GTTAATCTGA CCGACACCGT GTGGATGTTT CCGCGTTGCT CGACCGACAG TCCGGCCAAT 
TCGAGCGGTC CCGCCTATTA TGACGTGAAG TACTCCAGTT CGACGACCAC GTGCACGTGT 
CTCCAGCACT TGCAGTACAA GAATTGTTAG 

 

Protein sequence

MIRRSFPVRS LQADVDAVAA TEFAIVVPFL LLLFIGGVEL ANGMAISVKV SATAHSVADM 
VTQNTSLSTT SMQNILTGAT ATIAPYSVND SSGKSLLTVT VSEVSSDANG NLTLQWSRSF 
NGATFGSGRT SLSGLTVPTS LNGTVGNASN PNNQNDQVSF IVGEVSYAYT PNLGFTISGT 
VNLTDTVWMF PRCSTDSPAN SSGPAYYDVK YSSSTTTCTC LQHLQYKNC