Gene Rpal_0793 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRpal_0793 
Symbol 
ID6408446 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRhodopseudomonas palustris TIE-1 
KingdomBacteria 
Replicon accessionNC_011004 
Strand
Start bp831160 
End bp831939 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content70% 
IMG OID642710706 
ProductABC transporter related 
Protein accessionYP_001989826 
Protein GI192289221 
COG category[H] Coenzyme transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG1120] ABC-type cobalamin/Fe3+-siderophores transport systems, ATPase components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGCCG CCTTCCTCAC TGCGCGCGAT CTCGCCGTCA CGCTGTCCGG CCGCGAGGTG 
CTACGTGGTG TGTCGCTGTC ACTGACCCGC GGGCATCTGG TGGCGCTGGT CGGCCCCAAC
GGCGCCGGCA AGACCACGCT GCTGCGTGCC CTCGCCGGCC TGGTCGAGGC GCAGGGCGAG
ATCAAGATCG GCGGCGATTC CTTGGCGGCA TTGCCGCTGC GCGAACGCGC CAAGCGGTTC
GGCTATTTGC CGCAGGGCCA TCTGGTGCAT TGGCCGCTGC CGGTGCGGGA CGTCGTCGCA
CTCGGCCGGT TTCCGCACGG CGCCACCGAT CCGGCCTGGC TGTCGCCGCA CGATGCCGAG
GCGGTGACGC GCGCAATGGC GGTGACCGAC GTCGCCCAGT TCGCCGACCG CATCGTCACC
GAACTGTCCG GCGGCGAACG CAGCCGCGTC GCGCTCGCCC GCGTGTTGGC AGTCGAGGCG
CCGGTGGTGC TCGCCGACGA GCCGACCGCC TCGCTCGATC CGCGCTATCA GCTCGACGTG
ATGCAGACCT TGCGTACCAC CGCCGACGCC GGCACGTTGG TGATCGTTGT CACCCACGAC
CTCGGCCTCG CCGCGCGCTT TGCCGATACC GTTCTGGTGA TGGCGAATGG CGGGCTCGCT
GCCCATGGCA CGCCCGCCGA AGCGCTGTCG GACGAGATCA TGCAGCAGGT CTTTCGCGTC
AGCGCCTATC GGGCACAATA TCAGGACAGC GGCGTGATCC TGCCGTGGTC CGGAACCTGA
 
Protein sequence
MTAAFLTARD LAVTLSGREV LRGVSLSLTR GHLVALVGPN GAGKTTLLRA LAGLVEAQGE 
IKIGGDSLAA LPLRERAKRF GYLPQGHLVH WPLPVRDVVA LGRFPHGATD PAWLSPHDAE
AVTRAMAVTD VAQFADRIVT ELSGGERSRV ALARVLAVEA PVVLADEPTA SLDPRYQLDV
MQTLRTTADA GTLVIVVTHD LGLAARFADT VLVMANGGLA AHGTPAEALS DEIMQQVFRV
SAYRAQYQDS GVILPWSGT